Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 VTRNA3-1P-201ENST00000362552 102 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL353662.1-201ENST00000439099 327 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 PMS2P9-201ENST00000441237 515 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 RANP2-201ENST00000456833 229 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC011476.1-201ENST00000466725 307 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 RNA5SP318-201ENST00000516352 92 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC135626.1-201ENST00000556983 435 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC026898.1-201ENST00000586404 571 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 MIR6809-201ENST00000612189 116 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 RN7SKP216-201ENST00000411050 312 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL121916.1-201ENST00000429405 308 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 TUBB4BP6-201ENST00000437576 479 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC005077.1-201ENST00000449226 375 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AP004607.6-201ENST00000525033 1202 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AC092266.1-201ENST00000610958 165 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC1.93□□□□□ -2.1
SYNE1Q8NF91 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC1.93□□□□□ -2.1
SYNE1Q8NF91 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 SNORA38B-201ENST00000363524 131 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 KRTAP8-2P-201ENST00000440620 186 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 SSX8-201ENST00000506270 579 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 MRPL57P1-201ENST00000621486 265 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 MTCO1P25-201ENST00000414449 1799 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AL161901.1-201ENST00000624954 3425 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AL139805.1-201ENST00000407837 289 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 OR2AT2P-201ENST00000413438 905 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 RPL7AP14-201ENST00000424041 802 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 CRYGGP-201ENST00000443337 145 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 RPS27AP2-201ENST00000457576 465 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 FTH1P2-201ENST00000466086 412 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 BNIP3P32-201ENST00000600015 554 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 Six3os1_4.1-201ENST00000615706 324 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 RPL12P13-201ENST00000310055 497 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 MTND6P1-201ENST00000417434 424 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AC239367.3-201ENST00000428996 814 ntBASIC1.92□□□□□ -2.1
SYNE1Q8NF91 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC1.92□□□□□ -2.1
SYNE1Q8NF91 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms