Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 MTCO3P31-201ENST00000405526 789 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 VTA1P1-201ENST00000414044 866 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC092601.1-201ENST00000444526 383 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AL451074.4-201ENST00000447545 470 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 RN7SL325P-201ENST00000460434 283 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AL121769.1-201ENST00000469473 401 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AL024509.2-201ENST00000493462 493 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AL445187.1-201ENST00000502685 260 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC114967.1-201ENST00000504890 259 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 UGT2A3P7-201ENST00000510485 734 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 RNU6-1045P-201ENST00000516321 107 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AP003084.1-201ENST00000524828 742 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC022690.1-201ENST00000526681 550 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC091489.2-201ENST00000566263 604 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 U73023.1-201ENST00000603134 700 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC103792.1-201ENST00000603591 919 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 CUX2P1-201ENST00000606426 298 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC015982.1-201ENST00000608113 465 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC080112.3-201ENST00000612552 880 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 AC005753.1-201ENST00000623837 618 ntBASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RSPO4Q2I0M5 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AL136140.2-201ENST00000624717 1705 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AL049833.3-201ENST00000623920 3738 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 LINC02128-205ENST00000641755 1334 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 Y_RNA.256-201ENST00000364594 104 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 SNORA30-201ENST00000384028 129 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 SNORA10B-201ENST00000384458 133 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 PDCL3P5-201ENST00000398028 722 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AL590084.1-201ENST00000407885 387 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AL139184.1-202ENST00000422303 222 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 MTND1P32-201ENST00000433043 938 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 TPMTP4-201ENST00000450749 678 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 RN7SL214P-201ENST00000487317 265 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC079203.1-201ENST00000487972 404 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 STMN1P2-201ENST00000508435 439 ntBASIC7.35□□□□□ -1.23
RSPO4Q2I0M5 AC011411.1-201ENST00000509592 876 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms