Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXF1Q12946 MIR3154-201ENST00000577829 84 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXF1Q12946 NPIPB1P-202ENST00000588786 828 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXF1Q12946 SMIM12P1-201ENST00000603004 274 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AP001823.1-201ENST00000604056 1003 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXF1Q12946 MIR6780B-201ENST00000610307 79 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.62□□□□□ -1.51
FOXF1Q12946 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 uc_338.31-201ENST00000615595 186 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AP003789.1-201ENST00000617737 605 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AC018659.2-201ENST00000624690 715 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.62□□□□□ -1.51
FOXF1Q12946 AC003992.1-201ENST00000635364 557 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AL357140.4-201ENST00000636827 412 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 AC092692.1-201ENST00000623625 2595 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
FOXF1Q12946 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
FOXF1Q12946 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
FOXF1Q12946 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
FOXF1Q12946 AC084782.1-201ENST00000564401 2465 ntBASIC5.62□□□□□ -1.51
FOXF1Q12946 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXF1Q12946 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
FOXF1Q12946 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXF1Q12946 RBBP4P5-201ENST00000398583 1266 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXF1Q12946 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 IGLV3-4-201ENST00000432300 244 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 TIMM8BP2-201ENST00000445940 251 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXF1Q12946 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC073594.1-201ENST00000462065 364 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AC108103.1-201ENST00000511286 446 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 MAST4-IT1-201ENST00000514241 658 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC036111.2-201ENST00000533247 901 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 OR4A40P-201ENST00000533878 948 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC096921.2-201ENST00000561507 1916 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 OR1E3-201ENST00000575608 948 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.61□□□□□ -1.51
FOXF1Q12946 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 AL352984.2-202ENST00000613699 155 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 MIR6721-201ENST00000617181 87 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AL137067.2-201ENST00000621202 131 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AL109924.4-201ENST00000623089 670 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AC073488.6-201ENST00000632293 754 ntBASIC5.61□□□□□ -1.51
FOXF1Q12946 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.61□□□□□ -1.51
FOXF1Q12946 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
FOXF1Q12946 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
FOXF1Q12946 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
FOXF1Q12946 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
FOXF1Q12946 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
FOXF1Q12946 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXF1Q12946 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
FOXF1Q12946 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXF1Q12946 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.6□□□□□ -1.51
FOXF1Q12946 AL353763.1-201ENST00000624467 1628 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXF1Q12946 OFD1P17-201ENST00000437639 3018 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FOXF1Q12946 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.6□□□□□ -1.51
FOXF1Q12946 MIR1275-201ENST00000408770 80 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.6□□□□□ -1.51
FOXF1Q12946 H3F3BP1-201ENST00000440551 403 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 EEF1B2P3-201ENST00000447718 678 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AC112187.1-201ENST00000455837 479 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AL022319.1-201ENST00000458183 1167 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 RN7SL254P-201ENST00000460609 284 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AC104339.1-201ENST00000465478 348 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.6□□□□□ -1.51
FOXF1Q12946 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.6□□□□□ -1.51
FOXF1Q12946 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms