Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CBX1P83916 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AC211486.3-201ENST00000412694 621 ntBASIC6.31□□□□□ -1.4
CBX1P83916 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CBX1P83916 RPL23AP85-201ENST00000421838 433 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.31□□□□□ -1.4
CBX1P83916 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.31□□□□□ -1.4
CBX1P83916 AL590128.1-201ENST00000433407 286 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 GAPDHP75-201ENST00000433910 943 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AC242426.1-201ENST00000435270 960 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 BX323845.2-201ENST00000458382 234 ntBASIC6.31□□□□□ -1.4
CBX1P83916 RN7SL223P-201ENST00000470401 294 ntBASIC6.31□□□□□ -1.4
CBX1P83916 RPL7P17-201ENST00000470927 724 ntBASIC6.31□□□□□ -1.4
CBX1P83916 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC6.31□□□□□ -1.4
CBX1P83916 AC091982.1-202ENST00000473923 343 ntBASIC6.31□□□□□ -1.4
CBX1P83916 RPL7AP23-201ENST00000482625 776 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AL591122.1-201ENST00000487348 492 ntBASIC6.31□□□□□ -1.4
CBX1P83916 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.31□□□□□ -1.4
CBX1P83916 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 OR5M6P-201ENST00000530227 937 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AC025252.2-201ENST00000537470 502 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.31□□□□□ -1.4
CBX1P83916 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.31□□□□□ -1.4
CBX1P83916 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CBX1P83916 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CBX1P83916 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.31□□□□□ -1.4
CBX1P83916 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 AC005070.1-201ENST00000603744 365 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AL109936.2-201ENST00000605350 650 ntBASIC6.31□□□□□ -1.4
CBX1P83916 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AC083964.1-201ENST00000607549 630 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AL162574.1-201ENST00000615702 950 ntBASIC6.31□□□□□ -1.4
CBX1P83916 uc_338.37-201ENST00000620113 186 ntBASIC6.31□□□□□ -1.4
CBX1P83916 AL353608.4-201ENST00000624487 1188 ntBASIC6.31□□□□□ -1.4
CBX1P83916 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CBX1P83916 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CBX1P83916 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.31□□□□□ -1.4
CBX1P83916 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC011755.1-201ENST00000623763 2049 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC026523.2-201ENST00000625039 7739 ntBASIC6.3□□□□□ -1.4
CBX1P83916 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 RNU1-21P-201ENST00000363327 163 ntBASIC6.3□□□□□ -1.4
CBX1P83916 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 AL445238.1-204ENST00000400311 463 ntBASIC6.3□□□□□ -1.4
CBX1P83916 CTSL3P-202ENST00000412179 788 ntBASIC6.3□□□□□ -1.4
CBX1P83916 PPIAP30-201ENST00000415473 519 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.3□□□□□ -1.4
CBX1P83916 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.3□□□□□ -1.4
CBX1P83916 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 AC000362.1-201ENST00000433725 425 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC108039.2-201ENST00000440214 359 ntBASIC6.3□□□□□ -1.4
CBX1P83916 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 AL591379.2-201ENST00000450223 397 ntBASIC6.3□□□□□ -1.4
CBX1P83916 CBX1P2-201ENST00000453841 458 ntBASIC6.3□□□□□ -1.4
CBX1P83916 RAB28P2-201ENST00000454299 641 ntBASIC6.3□□□□□ -1.4
CBX1P83916 RPLP0P1-201ENST00000457002 361 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.3□□□□□ -1.4
CBX1P83916 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.3□□□□□ -1.4
CBX1P83916 OR9A1P-202ENST00000484361 945 ntBASIC6.3□□□□□ -1.4
CBX1P83916 COX6B1P2-201ENST00000489624 230 ntBASIC6.3□□□□□ -1.4
CBX1P83916 OR7E157P-201ENST00000494376 911 ntBASIC6.3□□□□□ -1.4
CBX1P83916 OR7E99P-201ENST00000505750 922 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.3□□□□□ -1.4
CBX1P83916 TPM3P3-201ENST00000521343 354 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC078899.1-201ENST00000521432 1185 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.3□□□□□ -1.4
CBX1P83916 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AL031846.1-201ENST00000560933 314 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.3□□□□□ -1.4
CBX1P83916 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.3□□□□□ -1.4
CBX1P83916 AC090616.1-201ENST00000583895 447 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms