Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL162632.2-201ENST00000553933 399 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 CHEK2P2-201ENST00000554701 672 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL356986.1-201ENST00000604085 341 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC025171.4-201ENST00000607250 1047 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 OR51C1P-201ENST00000608504 942 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC073575.2-201ENST00000614212 627 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 MIR7854-201ENST00000620068 65 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CL1P78423 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC022613.3-201ENST00000560740 1346 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC093909.5-201ENST00000621839 1799 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CX3CL1P78423 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CX3CL1P78423 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CX3CL1P78423 RN7SKP118-201ENST00000364331 330 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 RNU1-46P-201ENST00000384425 164 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 SNORA40.4-201ENST00000390971 128 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AL451046.1-201ENST00000406097 534 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 SPATA20P1-201ENST00000423089 438 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AP003385.1-201ENST00000426387 893 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 VN1R53P-201ENST00000429536 957 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 LDHAP2-201ENST00000437325 985 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 UBBP5-201ENST00000446970 266 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CX3CL1P78423 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 IGLV3-6-201ENST00000523937 250 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC074029.2-201ENST00000551045 634 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.24□□□□□ -1.57
CX3CL1P78423 RPL7AP69-201ENST00000595306 806 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC005972.3-201ENST00000606304 481 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AL136370.1-201ENST00000608166 691 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AC093635.1-201ENST00000609028 555 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 MIR6849-201ENST00000618543 69 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 AL109620.1-201ENST00000618738 1197 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.24□□□□□ -1.57
CX3CL1P78423 AC114546.4-201ENST00000624413 369 ntBASIC5.24□□□□□ -1.57
CX3CL1P78423 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.24□□□□□ -1.57
CX3CL1P78423 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms