Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC012005.2-201ENST00000624333 397 ntBASIC5.68□□□□□ -1.5
SEC61A1P61619 AL162377.2-201ENST00000624532 337 ntBASIC5.68□□□□□ -1.5
SEC61A1P61619 CLUHP10-201ENST00000631979 980 ntBASIC5.68□□□□□ -1.5
SEC61A1P61619 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 MSL3P1-202ENST00000440028 1468 ntBASIC5.68□□□□□ -1.5
SEC61A1P61619 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A1P61619 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A1P61619 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A1P61619 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A1P61619 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A1P61619 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A1P61619 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEC61A1P61619 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 RNU6-891P-201ENST00000384280 111 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 MIR551B-201ENST00000384984 96 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 AL034417.1-201ENST00000399343 800 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 RPS26P38-201ENST00000414476 348 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 CDC42P6-201ENST00000421246 576 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 RPEP4-201ENST00000437636 602 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 RPL12P49-201ENST00000441100 121 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AL356121.1-201ENST00000442911 156 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC002075.1-201ENST00000457396 676 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 MARK2P8-201ENST00000476069 952 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 RN7SL502P-201ENST00000481857 290 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 RN7SL187P-201ENST00000495587 303 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC092349.1-201ENST00000504903 310 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC093815.1-201ENST00000508637 280 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AP005639.1-201ENST00000526939 192 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 MTND4LP25-201ENST00000570218 163 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.67□□□□□ -1.5
SEC61A1P61619 AL354718.1-201ENST00000619764 589 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 AC020763.5-201ENST00000623298 430 ntBASIC5.67□□□□□ -1.5
SEC61A1P61619 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A1P61619 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A1P61619 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SEC61A1P61619 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC015799.1-201ENST00000622996 3122 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms