Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.15□□□□□ -1.42
SUMO3P55854 AC104229.1-201ENST00000561364 255 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SUMO3P55854 AC090666.1-201ENST00000578241 445 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.15□□□□□ -1.42
SUMO3P55854 OR7E19P-202ENST00000589942 844 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 AC068020.1-201ENST00000594215 661 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 AC130352.1-201ENST00000602979 661 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 AC078880.5-201ENST00000617845 421 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 AC073862.4-201ENST00000622982 854 ntBASIC6.15□□□□□ -1.42
SUMO3P55854 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.15□□□□□ -1.42
SUMO3P55854 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.15□□□□□ -1.43
SUMO3P55854 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 AC008432.1-201ENST00000615912 1320 ntBASIC6.15□□□□□ -1.43
SUMO3P55854 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SUMO3P55854 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SUMO3P55854 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 FO082842.1-201ENST00000423552 1370 ntBASIC6.15□□□□□ -1.43
SUMO3P55854 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 MAPK10-344ENST00000641718 3746 ntBASIC6.15□□□□□ -1.43
SUMO3P55854 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SUMO3P55854 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SUMO3P55854 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SUMO3P55854 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 SPATA31C1-201ENST00000420021 3895 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SUMO3P55854 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SUMO3P55854 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 MTND5P11-201ENST00000511037 1812 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AL669831.5-218ENST00000591702 1873 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 RN7SKP28-201ENST00000364770 305 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 RNA5SP355-201ENST00000365317 135 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 HMGB1P10-201ENST00000395823 563 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 HMGB3P19-201ENST00000403971 560 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 HYALP1-201ENST00000417674 1279 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 AL672212.1-201ENST00000422246 400 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 MTCO2P17-201ENST00000424336 677 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC000089.1-201ENST00000424559 801 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 RPL7AP23-201ENST00000482625 776 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 B3GNTL1P1-201ENST00000509174 289 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC091849.1-201ENST00000509920 121 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 HAUS1P3-201ENST00000523909 662 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC010287.1-201ENST00000566916 357 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 FAM106CP-201ENST00000582212 507 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC008507.2-201ENST00000588402 1176 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC019131.2-201ENST00000609071 870 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC063944.3-201ENST00000609969 533 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.14□□□□□ -1.43
SUMO3P55854 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 RPL23AP61-201ENST00000623642 466 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AP000577.1-201ENST00000624366 878 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
SUMO3P55854 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 AC137056.2-201ENST00000624055 1958 ntBASIC6.14□□□□□ -1.43
SUMO3P55854 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SUMO3P55854 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SUMO3P55854 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.14□□□□□ -1.43
SUMO3P55854 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms