Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL713998.2-201ENST00000604538 1198 ntBASIC5.93□□□□□ -1.46
CDH12P55289 AC005355.2-201ENST00000625064 484 ntBASIC5.93□□□□□ -1.46
CDH12P55289 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CDH12P55289 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CDH12P55289 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CDH12P55289 AC083899.2-201ENST00000423285 1376 ntBASIC5.93□□□□□ -1.46
CDH12P55289 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 SAGE3P-201ENST00000619800 1635 ntBASIC5.92□□□□□ -1.46
CDH12P55289 RBPJP6-201ENST00000411556 1431 ntBASIC5.92□□□□□ -1.46
CDH12P55289 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 RNU6-670P-201ENST00000364312 104 ntBASIC5.92□□□□□ -1.46
CDH12P55289 RNA5SP140-201ENST00000364524 92 ntBASIC5.92□□□□□ -1.46
CDH12P55289 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 AL672212.1-201ENST00000422246 400 ntBASIC5.92□□□□□ -1.46
CDH12P55289 E2F6P1-201ENST00000428850 745 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 E2F6P3-201ENST00000441743 743 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH12P55289 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 RPS3AP49-201ENST00000472161 790 ntBASIC5.92□□□□□ -1.46
CDH12P55289 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 AC073648.3-201ENST00000504939 925 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 SETP12-201ENST00000514068 805 ntBASIC5.92□□□□□ -1.46
CDH12P55289 RN7SKP5-201ENST00000517045 272 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.92□□□□□ -1.46
CDH12P55289 PPIAP14-201ENST00000577627 496 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.92□□□□□ -1.46
CDH12P55289 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 U1.41-201ENST00000617626 165 ntBASIC5.92□□□□□ -1.46
CDH12P55289 MIR7854-201ENST00000620068 65 ntBASIC5.92□□□□□ -1.46
CDH12P55289 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 AC005514.1-201ENST00000623521 208 ntBASIC5.92□□□□□ -1.46
CDH12P55289 AL162377.2-201ENST00000624532 337 ntBASIC5.92□□□□□ -1.46
CDH12P55289 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CDH12P55289 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.92□□□□□ -1.46
CDH12P55289 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.92□□□□□ -1.46
CDH12P55289 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 RNU6-386P-201ENST00000362650 107 ntBASIC5.91□□□□□ -1.46
CDH12P55289 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 MIR138-2-201ENST00000384916 84 ntBASIC5.91□□□□□ -1.46
CDH12P55289 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH12P55289 RNU6-1176P-201ENST00000390955 107 ntBASIC5.91□□□□□ -1.46
CDH12P55289 FDPSP5-201ENST00000399474 1057 ntBASIC5.91□□□□□ -1.46
CDH12P55289 RANP6-201ENST00000413691 644 ntBASIC5.91□□□□□ -1.46
CDH12P55289 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AC245884.2-201ENST00000426257 404 ntBASIC5.91□□□□□ -1.46
CDH12P55289 RPS10P14-201ENST00000440748 502 ntBASIC5.91□□□□□ -1.46
CDH12P55289 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 AL022319.1-201ENST00000458183 1167 ntBASIC5.91□□□□□ -1.46
CDH12P55289 RN7SKP198-201ENST00000459286 306 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH12P55289 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms