Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 AC007114.2-201ENST00000576014 4281 ntBASIC6.41□□□□□ -1.38
CDH4P55283 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 AC007406.5-201ENST00000570140 3170 ntBASIC6.41□□□□□ -1.38
CDH4P55283 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH4P55283 AC011815.2-201ENST00000618230 2021 ntBASIC6.4□□□□□ -1.38
CDH4P55283 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDH4P55283 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
CDH4P55283 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.4□□□□□ -1.38
CDH4P55283 GCNT1P4-201ENST00000404096 329 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 LDHAP2-201ENST00000437325 985 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC016908.1-201ENST00000442571 1219 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 CT45A11P-201ENST00000448043 1134 ntBASIC6.4□□□□□ -1.38
CDH4P55283 OR52I1-201ENST00000450052 1050 ntBASIC6.4□□□□□ -1.38
CDH4P55283 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH4P55283 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDH4P55283 RPA2P3-201ENST00000533268 770 ntBASIC6.4□□□□□ -1.38
CDH4P55283 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.4□□□□□ -1.38
CDH4P55283 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 AC027667.1-201ENST00000545814 304 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 MIR4301-201ENST00000577203 66 ntBASIC6.4□□□□□ -1.38
CDH4P55283 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.4□□□□□ -1.38
CDH4P55283 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH4P55283 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 AC124916.2-201ENST00000604416 224 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AL683813.2-201ENST00000605245 502 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC024589.2-201ENST00000605642 1294 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.4□□□□□ -1.38
CDH4P55283 AL352984.2-201ENST00000611153 546 ntBASIC6.4□□□□□ -1.38
CDH4P55283 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.4□□□□□ -1.38
CDH4P55283 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CDH4P55283 AC073592.6-201ENST00000624271 415 ntBASIC6.4□□□□□ -1.38
CDH4P55283 AC073593.1-201ENST00000624500 411 ntBASIC6.4□□□□□ -1.38
CDH4P55283 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.4□□□□□ -1.38
CDH4P55283 AC022726.2-201ENST00000634673 547 ntBASIC6.4□□□□□ -1.38
CDH4P55283 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH4P55283 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH4P55283 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.4□□□□□ -1.39
CDH4P55283 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH4P55283 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDH4P55283 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.4□□□□□ -1.39
CDH4P55283 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CDH4P55283 XKRY2-202ENST00000623874 1581 ntBASIC6.4□□□□□ -1.39
CDH4P55283 XKRY-202ENST00000624960 1581 ntBASIC6.4□□□□□ -1.39
CDH4P55283 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH4P55283 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 AC027575.3-201ENST00000583058 2747 ntBASIC6.39□□□□□ -1.39
CDH4P55283 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 AC024651.2-201ENST00000562480 2098 ntBASIC6.39□□□□□ -1.39
CDH4P55283 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH4P55283 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH4P55283 RN7SKP161-201ENST00000411110 305 ntBASIC6.39□□□□□ -1.39
CDH4P55283 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH4P55283 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 PSMD10P2-201ENST00000432890 672 ntBASIC6.39□□□□□ -1.39
CDH4P55283 OR3D1P-201ENST00000438288 955 ntBASIC6.39□□□□□ -1.39
CDH4P55283 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 RN7SL170P-201ENST00000487098 295 ntBASIC6.39□□□□□ -1.39
CDH4P55283 Y_RNA.710-201ENST00000516975 110 ntBASIC6.39□□□□□ -1.39
CDH4P55283 AC011853.1-201ENST00000518911 454 ntBASIC6.39□□□□□ -1.39
CDH4P55283 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 MRPS21P8-201ENST00000569196 235 ntBASIC6.39□□□□□ -1.39
CDH4P55283 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.39□□□□□ -1.39
CDH4P55283 MIR3189-201ENST00000578735 73 ntBASIC6.39□□□□□ -1.39
CDH4P55283 AC027229.1-201ENST00000583887 253 ntBASIC6.39□□□□□ -1.39
CDH4P55283 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH4P55283 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.39□□□□□ -1.39
CDH4P55283 AC011497.2-201ENST00000600255 639 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms