Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.74□□□□□ -1.49
SOX2P48431 TUBBP11-201ENST00000472255 252 ntBASIC5.74□□□□□ -1.49
SOX2P48431 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 TECRP2-201ENST00000503270 928 ntBASIC5.74□□□□□ -1.49
SOX2P48431 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.74□□□□□ -1.49
SOX2P48431 AC091849.1-201ENST00000509920 121 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.74□□□□□ -1.49
SOX2P48431 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 RNU6-319P-201ENST00000516025 108 ntBASIC5.74□□□□□ -1.49
SOX2P48431 RNU6-334P-201ENST00000517072 102 ntBASIC5.74□□□□□ -1.49
SOX2P48431 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 AC084337.1-201ENST00000524809 686 ntBASIC5.74□□□□□ -1.49
SOX2P48431 SNRPCP6-201ENST00000528310 210 ntBASIC5.74□□□□□ -1.49
SOX2P48431 OR4C1P-201ENST00000530880 937 ntBASIC5.74□□□□□ -1.49
SOX2P48431 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 AC090115.2-201ENST00000548060 883 ntBASIC5.74□□□□□ -1.49
SOX2P48431 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.74□□□□□ -1.49
SOX2P48431 AC092868.3-201ENST00000560515 784 ntBASIC5.74□□□□□ -1.49
SOX2P48431 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 AC233266.2-201ENST00000567067 528 ntBASIC5.74□□□□□ -1.49
SOX2P48431 RN7SL339P-201ENST00000580597 296 ntBASIC5.74□□□□□ -1.49
SOX2P48431 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.74□□□□□ -1.49
SOX2P48431 AC012510.1-201ENST00000607946 759 ntBASIC5.74□□□□□ -1.49
SOX2P48431 MIR6762-201ENST00000613340 86 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC025016.1-201ENST00000616746 682 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC005277.2-201ENST00000617898 390 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AC012629.3-201ENST00000623397 328 ntBASIC5.74□□□□□ -1.49
SOX2P48431 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 TMEM30CP-203ENST00000637814 1035 ntBASIC5.74□□□□□ -1.49
SOX2P48431 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.74□□□□□ -1.49
SOX2P48431 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
SOX2P48431 AL161901.1-201ENST00000624954 3425 ntBASIC5.74□□□□□ -1.49
SOX2P48431 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SOX2P48431 PWRN1-212ENST00000569908 1435 ntBASIC5.74□□□□□ -1.49
SOX2P48431 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SOX2P48431 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SOX2P48431 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SOX2P48431 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SOX2P48431 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 CCDC150P1-201ENST00000537123 2215 ntBASIC5.73□□□□□ -1.49
SOX2P48431 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 OR11H13P-201ENST00000359695 979 ntBASIC5.73□□□□□ -1.49
SOX2P48431 SNORD8-201ENST00000363915 110 ntBASIC5.73□□□□□ -1.49
SOX2P48431 MIR122-201ENST00000385044 85 ntBASIC5.73□□□□□ -1.49
SOX2P48431 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SOX2P48431 RNA5SP176-201ENST00000390956 110 ntBASIC5.73□□□□□ -1.49
SOX2P48431 PDCL3P5-201ENST00000398028 722 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AL359694.1-201ENST00000403247 604 ntBASIC5.73□□□□□ -1.49
SOX2P48431 RNU6-584P-201ENST00000410350 95 ntBASIC5.73□□□□□ -1.49
SOX2P48431 SEPT7P8-201ENST00000413308 775 ntBASIC5.73□□□□□ -1.49
SOX2P48431 VN1R31P-201ENST00000417498 730 ntBASIC5.73□□□□□ -1.49
SOX2P48431 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 RPS17P17-201ENST00000419392 409 ntBASIC5.73□□□□□ -1.49
SOX2P48431 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.73□□□□□ -1.49
SOX2P48431 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 Z80107.1-201ENST00000436830 412 ntBASIC5.73□□□□□ -1.49
SOX2P48431 PHBP4-201ENST00000437447 837 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AL645931.1-201ENST00000439737 410 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SOX2P48431 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC002075.1-201ENST00000457396 676 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC079193.1-201ENST00000460497 588 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 RPL23AP64-201ENST00000469465 435 ntBASIC5.73□□□□□ -1.49
SOX2P48431 RN7SL390P-201ENST00000470634 284 ntBASIC5.73□□□□□ -1.49
SOX2P48431 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.73□□□□□ -1.49
SOX2P48431 TRAV31-201ENST00000502780 342 ntBASIC5.73□□□□□ -1.49
SOX2P48431 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC5.73□□□□□ -1.49
SOX2P48431 AC134698.1-201ENST00000511619 643 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms