Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 RNA5SP514-201ENST00000363717 111 ntBASIC6.24□□□□□ -1.41
RPA3P35244 SNORA64.3-201ENST00000365647 134 ntBASIC6.24□□□□□ -1.41
RPA3P35244 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RPA3P35244 AC017035.1-201ENST00000411999 1115 ntBASIC6.24□□□□□ -1.41
RPA3P35244 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 AC083862.1-201ENST00000427378 1242 ntBASIC6.24□□□□□ -1.41
RPA3P35244 AL590399.2-201ENST00000427536 309 ntBASIC6.24□□□□□ -1.41
RPA3P35244 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 RPL12P16-201ENST00000431098 498 ntBASIC6.24□□□□□ -1.41
RPA3P35244 AC234771.2-201ENST00000445718 597 ntBASIC6.24□□□□□ -1.41
RPA3P35244 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 AC099670.1-201ENST00000455141 783 ntBASIC6.24□□□□□ -1.41
RPA3P35244 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 CYP4F27P-201ENST00000514557 494 ntBASIC6.24□□□□□ -1.41
RPA3P35244 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 AC124891.1-201ENST00000536322 519 ntBASIC6.24□□□□□ -1.41
RPA3P35244 TDGP1-201ENST00000543961 1229 ntBASIC6.24□□□□□ -1.41
RPA3P35244 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.24□□□□□ -1.41
RPA3P35244 TPRX1P1-201ENST00000557620 319 ntBASIC6.24□□□□□ -1.41
RPA3P35244 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.24□□□□□ -1.41
RPA3P35244 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 MIR6813-201ENST00000621638 56 ntBASIC6.24□□□□□ -1.41
RPA3P35244 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RPA3P35244 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.24□□□□□ -1.41
RPA3P35244 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RPA3P35244 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.24□□□□□ -1.41
RPA3P35244 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.24□□□□□ -1.41
RPA3P35244 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RPA3P35244 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
RPA3P35244 RPL31P11-201ENST00000426558 1558 ntBASIC6.23□□□□□ -1.41
RPA3P35244 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 SNORD16-201ENST00000362803 99 ntBASIC6.23□□□□□ -1.41
RPA3P35244 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.23□□□□□ -1.41
RPA3P35244 Z82198.3-201ENST00000421145 199 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AL139184.1-202ENST00000422303 222 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.23□□□□□ -1.41
RPA3P35244 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 USP24P1-201ENST00000433802 779 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.23□□□□□ -1.41
RPA3P35244 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 AC018645.1-201ENST00000505003 109 ntBASIC6.23□□□□□ -1.41
RPA3P35244 NACAP5-201ENST00000509863 636 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.23□□□□□ -1.41
RPA3P35244 RPA2P3-201ENST00000533268 770 ntBASIC6.23□□□□□ -1.41
RPA3P35244 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 MIR3157-201ENST00000578688 85 ntBASIC6.23□□□□□ -1.41
RPA3P35244 RN7SL475P-201ENST00000583379 298 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.23□□□□□ -1.41
RPA3P35244 WBP1LP11-201ENST00000586141 328 ntBASIC6.23□□□□□ -1.41
RPA3P35244 MIR132-201ENST00000591554 101 ntBASIC6.23□□□□□ -1.41
RPA3P35244 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.23□□□□□ -1.41
RPA3P35244 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.23□□□□□ -1.41
RPA3P35244 AC099654.15-201ENST00000639802 509 ntBASIC6.23□□□□□ -1.41
RPA3P35244 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.23□□□□□ -1.41
RPA3P35244 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RPA3P35244 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 ABCA11P-202ENST00000504019 2110 ntBASIC6.23□□□□□ -1.41
RPA3P35244 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.23□□□□□ -1.41
RPA3P35244 KYNUP3-201ENST00000574386 1341 ntBASIC6.23□□□□□ -1.41
RPA3P35244 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.22□□□□□ -1.41
RPA3P35244 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RPA3P35244 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RPA3P35244 MIR191-201ENST00000384873 92 ntBASIC6.22□□□□□ -1.41
RPA3P35244 RN7SKP38-201ENST00000410782 309 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms