Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.63□□□□□ -1.35
CTNNA1P35221 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 AP002004.1-206ENST00000532441 876 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.63□□□□□ -1.35
CTNNA1P35221 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.63□□□□□ -1.35
CTNNA1P35221 TPRX1P1-201ENST00000557620 319 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 MRPL45P2-203ENST00000573318 473 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.63□□□□□ -1.35
CTNNA1P35221 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA1P35221 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.63□□□□□ -1.35
CTNNA1P35221 VN1R81P-201ENST00000602085 372 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 AC012175.1-201ENST00000603755 531 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA1P35221 AL442128.2-201ENST00000620246 1824 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 AC092724.1-201ENST00000624623 3397 ntBASIC6.63□□□□□ -1.35
CTNNA1P35221 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.63□□□□□ -1.35
CTNNA1P35221 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.63□□□□□ -1.35
CTNNA1P35221 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
CTNNA1P35221 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CTNNA1P35221 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.62□□□□□ -1.35
CTNNA1P35221 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA1P35221 CUL4AP1-201ENST00000514750 1863 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
CTNNA1P35221 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC004014.2-201ENST00000623718 5122 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC092111.2-201ENST00000611627 1414 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CTNNA1P35221 RNA5SP308-201ENST00000362532 115 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 MIR433-201ENST00000384837 93 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 RN7SKP129-201ENST00000410288 299 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC021876.1-201ENST00000425959 359 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC073072.2-201ENST00000447425 348 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC009244.1-201ENST00000450566 258 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 OR52Y1P-201ENST00000452418 828 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 VPS25P1-201ENST00000455691 508 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC008868.1-201ENST00000509786 737 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA1P35221 SCARNA11.1-201ENST00000516918 132 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.62□□□□□ -1.35
CTNNA1P35221 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC009729.1-201ENST00000548873 1133 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC133552.4-201ENST00000576103 676 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC115989.2-201ENST00000578640 563 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 RN7SL475P-201ENST00000583379 298 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.62□□□□□ -1.35
CTNNA1P35221 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
CTNNA1P35221 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 OR5M2P-202ENST00000641241 4242 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA1P35221 AC096921.2-201ENST00000561507 1916 ntBASIC6.62□□□□□ -1.35
CTNNA1P35221 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CTNNA1P35221 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA1P35221 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA1P35221 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA1P35221 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CTNNA1P35221 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC027575.3-201ENST00000583058 2747 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CTNNA1P35221 RNU1-84P-201ENST00000365447 164 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 GNG5P2-201ENST00000372054 207 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 MIR138-2-201ENST00000384916 84 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 RPL7P58-201ENST00000402913 758 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 VN1R3-201ENST00000418822 919 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA1P35221 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA1P35221 RN7SL655P-201ENST00000486087 298 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 RN7SL350P-201ENST00000492591 299 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.61□□□□□ -1.35
CTNNA1P35221 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.61□□□□□ -1.35
CTNNA1P35221 AC018645.1-201ENST00000505003 109 ntBASIC6.61□□□□□ -1.35
CTNNA1P35221 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA1P35221 RNA5SP400-201ENST00000517155 111 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms