Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 AC003045.1-201ENST00000398779 713 ntBASIC6.89□□□□□ -1.31
BDNFP23560 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 AC022336.1-201ENST00000475510 337 ntBASIC6.89□□□□□ -1.31
BDNFP23560 MARK2P8-201ENST00000476069 952 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.89□□□□□ -1.31
BDNFP23560 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.89□□□□□ -1.31
BDNFP23560 AC131392.1-201ENST00000506490 633 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.89□□□□□ -1.31
BDNFP23560 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.89□□□□□ -1.31
BDNFP23560 AL133399.1-201ENST00000527476 298 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AC027026.1-201ENST00000532323 742 ntBASIC6.89□□□□□ -1.31
BDNFP23560 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.89□□□□□ -1.31
BDNFP23560 AC005000.1-201ENST00000536192 288 ntBASIC6.89□□□□□ -1.31
BDNFP23560 EIF1AXP2-201ENST00000555940 413 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.89□□□□□ -1.31
BDNFP23560 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BDNFP23560 AC015818.6-201ENST00000584274 634 ntBASIC6.89□□□□□ -1.31
BDNFP23560 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 AC013731.1-201ENST00000604340 883 ntBASIC6.89□□□□□ -1.31
BDNFP23560 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.89□□□□□ -1.31
BDNFP23560 MIR6085-201ENST00000618314 110 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AC074140.1-201ENST00000621617 208 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AL122023.1-201ENST00000622847 530 ntBASIC6.89□□□□□ -1.31
BDNFP23560 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.89□□□□□ -1.31
BDNFP23560 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 AC015689.2-201ENST00000528172 1738 ntBASIC6.89□□□□□ -1.31
BDNFP23560 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.89□□□□□ -1.31
BDNFP23560 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
BDNFP23560 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
BDNFP23560 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.88□□□□□ -1.31
BDNFP23560 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.88□□□□□ -1.31
BDNFP23560 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 RNU1-46P-201ENST00000384425 164 ntBASIC6.88□□□□□ -1.31
BDNFP23560 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
BDNFP23560 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.88□□□□□ -1.31
BDNFP23560 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.88□□□□□ -1.31
BDNFP23560 AL359885.1-201ENST00000415786 903 ntBASIC6.88□□□□□ -1.31
BDNFP23560 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
BDNFP23560 TPTE2P1-204ENST00000435256 593 ntBASIC6.88□□□□□ -1.31
BDNFP23560 AL139156.3-201ENST00000454802 394 ntBASIC6.88□□□□□ -1.31
BDNFP23560 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.88□□□□□ -1.31
BDNFP23560 RN7SL649P-201ENST00000496974 275 ntBASIC6.88□□□□□ -1.31
BDNFP23560 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.88□□□□□ -1.31
BDNFP23560 HMGN1P16-201ENST00000508308 283 ntBASIC6.88□□□□□ -1.31
BDNFP23560 AC117525.1-201ENST00000515228 503 ntBASIC6.88□□□□□ -1.31
BDNFP23560 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.88□□□□□ -1.31
BDNFP23560 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.88□□□□□ -1.31
BDNFP23560 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.88□□□□□ -1.31
BDNFP23560 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.88□□□□□ -1.31
BDNFP23560 AL359091.2-201ENST00000609303 556 ntBASIC6.88□□□□□ -1.31
BDNFP23560 MRPL57P1-201ENST00000621486 265 ntBASIC6.88□□□□□ -1.31
BDNFP23560 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
BDNFP23560 AC009120.2-204ENST00000621548 2032 ntBASIC6.88□□□□□ -1.31
BDNFP23560 TTC41P-205ENST00000551270 3963 ntBASIC6.87□□□□□ -1.31
BDNFP23560 LINC01613-201ENST00000561476 2780 ntBASIC6.87□□□□□ -1.31
BDNFP23560 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
BDNFP23560 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 AC107977.1-201ENST00000355745 939 ntBASIC6.87□□□□□ -1.31
BDNFP23560 SNORD35A-201ENST00000363389 86 ntBASIC6.87□□□□□ -1.31
BDNFP23560 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
BDNFP23560 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.87□□□□□ -1.31
BDNFP23560 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
BDNFP23560 RNA5SP105-201ENST00000391123 113 ntBASIC6.87□□□□□ -1.31
BDNFP23560 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 PSMA6P1-201ENST00000400275 741 ntBASIC6.87□□□□□ -1.31
BDNFP23560 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.87□□□□□ -1.31
BDNFP23560 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
BDNFP23560 AL139158.1-201ENST00000424719 340 ntBASIC6.87□□□□□ -1.31
BDNFP23560 AC007383.1-201ENST00000445875 636 ntBASIC6.87□□□□□ -1.31
BDNFP23560 EEF1B2P3-201ENST00000447718 678 ntBASIC6.87□□□□□ -1.31
BDNFP23560 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.87□□□□□ -1.31
BDNFP23560 C1DP3-201ENST00000455013 423 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms