Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6□□□□□ -1.45
TNFSF4P23510 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
TNFSF4P23510 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TNFSF4P23510 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6□□□□□ -1.45
TNFSF4P23510 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6□□□□□ -1.45
TNFSF4P23510 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
TNFSF4P23510 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 MTCO1P15-201ENST00000529569 1526 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AL358913.2-201ENST00000553881 1548 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TNFSF4P23510 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 IARS-205ENST00000443024 4341 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 SNORD56.4-201ENST00000363883 71 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RN7SKP107-201ENST00000364157 290 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 RNU6-532P-201ENST00000384318 107 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RN7SKP62-201ENST00000384539 329 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RNA5SP35-201ENST00000391257 129 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RPL22P22-201ENST00000395439 379 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RN7SKP137-201ENST00000411074 307 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 CYP4F32P-201ENST00000426492 504 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 VN1R53P-201ENST00000429536 957 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 BX119917.1-201ENST00000432517 502 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 YWHAZP2-201ENST00000440317 728 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 RPL34P26-201ENST00000445636 354 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC092685.1-201ENST00000447960 1243 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AL034399.1-201ENST00000451535 380 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 TVP23BP2-201ENST00000455082 615 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RN7SL160P-201ENST00000468558 284 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC037198.2-201ENST00000478845 733 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC026826.1-201ENST00000493002 361 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC112225.1-201ENST00000508230 297 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 RNA5SP116-201ENST00000516132 98 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 RN7SKP233-201ENST00000517005 110 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC5.99□□□□□ -1.45
TNFSF4P23510 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC122134.1-201ENST00000565664 1104 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AL365223.1-201ENST00000574864 1297 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC245884.10-201ENST00000597355 337 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC018618.2-201ENST00000604770 446 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AC026979.4-201ENST00000606555 645 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TNFSF4P23510 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
TNFSF4P23510 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
TNFSF4P23510 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.99□□□□□ -1.45
TNFSF4P23510 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.99□□□□□ -1.45
TNFSF4P23510 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TNFSF4P23510 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TNFSF4P23510 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 TPTE2P2-201ENST00000403471 1466 ntBASIC5.98□□□□□ -1.45
TNFSF4P23510 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TNFSF4P23510 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms