Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.02□□□□□ -1.12
LIG1P18858 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
LIG1P18858 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.02□□□□□ -1.12
LIG1P18858 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8.02□□□□□ -1.13
LIG1P18858 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 AL445238.1-204ENST00000400311 463 ntBASIC8.02□□□□□ -1.13
LIG1P18858 RNA5SP177-201ENST00000410122 107 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 AC017078.1-201ENST00000416146 368 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 Z84478.1-201ENST00000438230 1219 ntBASIC8.02□□□□□ -1.13
LIG1P18858 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 CYCSP44-201ENST00000448560 313 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 RPSAP7-201ENST00000456871 885 ntBASIC8.02□□□□□ -1.13
LIG1P18858 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 AC079594.1-201ENST00000489757 331 ntBASIC8.02□□□□□ -1.13
LIG1P18858 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 AC026826.1-201ENST00000493002 361 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC8.02□□□□□ -1.13
LIG1P18858 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC8.02□□□□□ -1.13
LIG1P18858 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.02□□□□□ -1.13
LIG1P18858 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 AC103855.4-201ENST00000533158 265 ntBASIC8.02□□□□□ -1.13
LIG1P18858 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 NDUFA3P4-201ENST00000560814 250 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC009094.1-201ENST00000564443 426 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC8.02□□□□□ -1.13
LIG1P18858 AC027455.1-201ENST00000574104 594 ntBASIC8.02□□□□□ -1.13
LIG1P18858 EIF1P5-201ENST00000585002 234 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AL109653.1-201ENST00000603091 248 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AL133247.2-201ENST00000603236 482 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC023206.1-201ENST00000605824 298 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AP002802.2-201ENST00000605877 235 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC012510.1-201ENST00000607946 759 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC021851.1-201ENST00000608537 1082 ntBASIC8.02□□□□□ -1.13
LIG1P18858 AC005332.10-201ENST00000612725 619 ntBASIC8.02□□□□□ -1.13
LIG1P18858 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 AC078909.2-201ENST00000620584 398 ntBASIC8.02□□□□□ -1.13
LIG1P18858 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.02□□□□□ -1.13
LIG1P18858 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC8.02□□□□□ -1.13
LIG1P18858 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LIG1P18858 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC8.01□□□□□ -1.13
LIG1P18858 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.01□□□□□ -1.13
LIG1P18858 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 RN7SKP28-201ENST00000364770 305 ntBASIC8.01□□□□□ -1.13
LIG1P18858 RNA5SP172-201ENST00000365061 118 ntBASIC8.01□□□□□ -1.13
LIG1P18858 U3.14-201ENST00000365363 227 ntBASIC8.01□□□□□ -1.13
LIG1P18858 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 Y_RNA.599-201ENST00000410489 109 ntBASIC8.01□□□□□ -1.13
LIG1P18858 RN7SKP271-201ENST00000410528 320 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LIG1P18858 TRIM60P17-201ENST00000415181 719 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 MFSD13B-201ENST00000420133 1290 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 FDPSP6-201ENST00000425091 512 ntBASIC8.01□□□□□ -1.13
LIG1P18858 CYP4F34P-201ENST00000425951 481 ntBASIC8.01□□□□□ -1.13
LIG1P18858 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 AC004022.1-201ENST00000447766 1066 ntBASIC8.01□□□□□ -1.13
LIG1P18858 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 AC090543.1-201ENST00000492168 485 ntBASIC8.01□□□□□ -1.13
LIG1P18858 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC8.01□□□□□ -1.13
LIG1P18858 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.01□□□□□ -1.13
LIG1P18858 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.01□□□□□ -1.13
LIG1P18858 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms