Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 SHQ1P1-201ENST00000437111 1544 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 AK4P4-201ENST00000419465 646 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 AL355433.1-201ENST00000422804 300 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 AC126120.1-201ENST00000431082 470 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 UBA52P7-201ENST00000486088 380 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 HMGN2P36-201ENST00000529541 409 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.89□□□□□ -1.31
COL11A1P12107 MIR4489-201ENST00000578869 62 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 FAM27E4-201ENST00000605259 342 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 AC008937.3-201ENST00000606813 1700 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 RN7SL787P-201ENST00000613000 284 ntBASIC6.89□□□□□ -1.31
COL11A1P12107 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.89□□□□□ -1.31
COL11A1P12107 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
COL11A1P12107 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.89□□□□□ -1.31
COL11A1P12107 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
COL11A1P12107 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.88□□□□□ -1.31
COL11A1P12107 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 CCNT2P1-201ENST00000423082 1315 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 AP002833.3-201ENST00000625075 2265 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.88□□□□□ -1.31
COL11A1P12107 AL391262.1-201ENST00000556558 1992 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.88□□□□□ -1.31
COL11A1P12107 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 AL663074.2-201ENST00000440621 479 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 AC073909.1-201ENST00000447112 999 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.88□□□□□ -1.31
COL11A1P12107 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.88□□□□□ -1.31
COL11A1P12107 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 AL512624.1-201ENST00000613638 469 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 AC024255.1-201ENST00000614376 102 ntBASIC6.88□□□□□ -1.31
COL11A1P12107 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.88□□□□□ -1.31
COL11A1P12107 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL11A1P12107 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 RNA5SP350-201ENST00000363298 111 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 SNRPEP6-201ENST00000407465 277 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 AC114728.1-201ENST00000488289 483 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 AC073581.1-201ENST00000519036 575 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.87□□□□□ -1.31
COL11A1P12107 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 AC105749.1-201ENST00000631338 2008 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.87□□□□□ -1.31
COL11A1P12107 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.87□□□□□ -1.31
COL11A1P12107 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 AC123769.1-201ENST00000530992 3192 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 OR9K1P-201ENST00000326513 941 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 FMO7P-201ENST00000436045 768 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms