Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 LCN1P2-201ENST00000372030 223 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 NDUFA5P8-201ENST00000449019 346 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 MTND2P3-201ENST00000452458 470 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC092824.1-201ENST00000483524 576 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 NPM1P27-201ENST00000502784 830 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC090958.1-201ENST00000511122 351 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC027369.2-201ENST00000528030 440 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 TRIM51DP-201ENST00000529746 596 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC073333.2-201ENST00000603589 769 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 RFPL4AP6-201ENST00000616792 846 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AL133243.2-201ENST00000610331 1621 ntBASIC7.44□□□□□ -1.22
HLA-DOAP06340 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.44□□□□□ -1.22
HLA-DOAP06340 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
HLA-DOAP06340 AP002364.1-201ENST00000623330 3386 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC013488.1-201ENST00000526618 1838 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 FAM32BP-201ENST00000344033 333 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 RNA5SP110-201ENST00000362638 115 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 TRGV5P-201ENST00000419915 354 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC009500.1-201ENST00000420684 583 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SETP10-201ENST00000424368 814 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 PPIAP10-201ENST00000438675 458 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 VPS25P1-201ENST00000455691 508 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 OR7L1P-201ENST00000456181 380 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 COL6A4P2-205ENST00000509855 506 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC112206.4-201ENST00000515142 405 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC078878.1-201ENST00000539832 958 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL096712.1-201ENST00000614561 159 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL512652.1-201ENST00000619006 500 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL355480.1-201ENST00000629041 99 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 EIF3EP1-201ENST00000433978 1316 ntBASIC7.43□□□□□ -1.22
HLA-DOAP06340 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
HLA-DOAP06340 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
HLA-DOAP06340 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms