Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
LDLRP01130 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.22□□□□□ -1.41
LDLRP01130 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
LDLRP01130 AL157831.2-201ENST00000564681 3095 ntBASIC6.22□□□□□ -1.41
LDLRP01130 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.22□□□□□ -1.41
LDLRP01130 LINC01616-201ENST00000561816 2280 ntBASIC6.22□□□□□ -1.41
LDLRP01130 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
LDLRP01130 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.21□□□□□ -1.41
LDLRP01130 AC010132.4-201ENST00000569883 1368 ntBASIC6.21□□□□□ -1.41
LDLRP01130 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
LDLRP01130 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 AC102941.1-201ENST00000567616 1537 ntBASIC6.21□□□□□ -1.42
LDLRP01130 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 SNORA70.3-201ENST00000365075 132 ntBASIC6.21□□□□□ -1.42
LDLRP01130 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 AC115283.1-201ENST00000427353 400 ntBASIC6.21□□□□□ -1.42
LDLRP01130 RPL34P27-201ENST00000428810 349 ntBASIC6.21□□□□□ -1.42
LDLRP01130 Z68868.1-201ENST00000429048 544 ntBASIC6.21□□□□□ -1.42
LDLRP01130 NFYAP1-201ENST00000431953 972 ntBASIC6.21□□□□□ -1.42
LDLRP01130 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 POU5F1P5-201ENST00000445059 658 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.21□□□□□ -1.42
LDLRP01130 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.21□□□□□ -1.42
LDLRP01130 AC113367.2-201ENST00000505749 160 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC011411.1-201ENST00000509592 876 ntBASIC6.21□□□□□ -1.42
LDLRP01130 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 MTCYBP44-201ENST00000514835 823 ntBASIC6.21□□□□□ -1.42
LDLRP01130 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.21□□□□□ -1.42
LDLRP01130 TDGP1-201ENST00000543961 1229 ntBASIC6.21□□□□□ -1.42
LDLRP01130 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.21□□□□□ -1.42
LDLRP01130 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 AP003115.1-201ENST00000569849 463 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.21□□□□□ -1.42
LDLRP01130 RN7SL270P-201ENST00000579643 281 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.21□□□□□ -1.42
LDLRP01130 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC015849.6-201ENST00000605454 474 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.21□□□□□ -1.42
LDLRP01130 AP000894.4-201ENST00000610185 483 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AP005212.4-201ENST00000614206 710 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC006213.4-201ENST00000616184 634 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC021422.1-201ENST00000621212 473 ntBASIC6.21□□□□□ -1.42
LDLRP01130 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.21□□□□□ -1.42
LDLRP01130 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 AC011369.2-201ENST00000624423 1567 ntBASIC6.21□□□□□ -1.42
LDLRP01130 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.21□□□□□ -1.42
LDLRP01130 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LDLRP01130 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
LDLRP01130 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LDLRP01130 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
LDLRP01130 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.21□□□□□ -1.42
LDLRP01130 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 TTC41P-205ENST00000551270 3963 ntBASIC6.2□□□□□ -1.42
LDLRP01130 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LDLRP01130 AL512329.1-201ENST00000404600 1592 ntBASIC6.2□□□□□ -1.42
LDLRP01130 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LDLRP01130 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AC018804.1-201ENST00000430381 618 ntBASIC6.2□□□□□ -1.42
LDLRP01130 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 ARMC4P1-201ENST00000438905 707 ntBASIC6.2□□□□□ -1.42
LDLRP01130 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AC005017.1-201ENST00000482002 490 ntBASIC6.2□□□□□ -1.42
LDLRP01130 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AC112484.3-201ENST00000505910 329 ntBASIC6.2□□□□□ -1.42
LDLRP01130 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.2□□□□□ -1.42
LDLRP01130 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LDLRP01130 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.2□□□□□ -1.42
LDLRP01130 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.2□□□□□ -1.42
LDLRP01130 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.2□□□□□ -1.42
LDLRP01130 AC073916.1-201ENST00000545095 130 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms