Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 UG0898H09-202ENST00000623646 7040 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.43□□□□□ -1.38
PDGFBP01127 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
PDGFBP01127 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.43□□□□□ -1.38
PDGFBP01127 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PDGFBP01127 C4BPAP1-201ENST00000415474 1893 ntBASIC6.43□□□□□ -1.38
PDGFBP01127 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PDGFBP01127 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.42□□□□□ -1.38
PDGFBP01127 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 AL078595.2-201ENST00000605309 1780 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFBP01127 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFBP01127 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFBP01127 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 SNORD16-201ENST00000362803 99 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 RN7SKP162-201ENST00000363605 345 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 U3.7-201ENST00000363668 216 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 RNA5SP132-201ENST00000364725 118 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AL096711.1-201ENST00000404780 554 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AL049697.3-201ENST00000406493 982 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFBP01127 RPL23AP85-201ENST00000421838 433 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AL512637.1-201ENST00000439523 1231 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AC005077.1-201ENST00000449226 375 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFBP01127 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 RPL23AP64-201ENST00000469465 435 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 AC111000.5-201ENST00000506559 1178 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFBP01127 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 AC004232.1-201ENST00000571388 208 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 OOSP1P2-201ENST00000579644 351 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 MIR8089-201ENST00000620165 82 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFBP01127 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFBP01127 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFBP01127 AC007993.1-201ENST00000621298 2430 ntBASIC6.42□□□□□ -1.38
PDGFBP01127 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFBP01127 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC107980.1-201ENST00000558671 3355 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFBP01127 RNU6-171P-201ENST00000384354 107 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 SNORA70-201ENST00000384436 135 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 AL132875.1-201ENST00000403623 949 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 RN7SKP121-201ENST00000410842 305 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC013410.1-201ENST00000436223 1232 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC090589.1-201ENST00000473109 362 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 RN7SL826P-201ENST00000479724 288 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 RN7SL714P-201ENST00000487050 298 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.41□□□□□ -1.38
PDGFBP01127 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.41□□□□□ -1.38
PDGFBP01127 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.41□□□□□ -1.38
PDGFBP01127 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
PDGFBP01127 MIR1269B-201ENST00000580405 75 ntBASIC6.41□□□□□ -1.38
PDGFBP01127 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms