Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CNOT4O95628 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 MIR421-201ENST00000365696 85 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 SNORD65-201ENST00000391079 73 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 RPL10P10-201ENST00000403509 664 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 SNORA11.5-201ENST00000408163 128 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 UBE2V1P11-201ENST00000411559 285 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 MFSD13B-201ENST00000420133 1290 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 MRPS21P3-201ENST00000436696 262 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AL133480.2-201ENST00000456723 487 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 BX323845.2-201ENST00000458382 234 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 RPL23P10-201ENST00000468780 412 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 SETP6-201ENST00000479329 568 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 RN7SL775P-201ENST00000498361 336 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC118282.2-201ENST00000508739 374 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC011352.1-201ENST00000512300 793 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.45□□□□□ -1.38
CNOT4O95628 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC105233.3-201ENST00000531125 744 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 OR7E128P-201ENST00000532736 1024 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AL356801.1-201ENST00000559320 294 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC027807.1-201ENST00000559921 996 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 RN7SL178P-201ENST00000582930 304 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC005479.3-201ENST00000602790 431 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AL136139.1-201ENST00000605568 222 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC107952.2-201ENST00000606048 486 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC135507.1-201ENST00000607214 561 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC093673.2-201ENST00000609674 331 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 RMST_5.1-201ENST00000618704 126 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AL035461.2-201ENST00000619201 524 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC017037.3-201ENST00000625016 472 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 AC092608.3-201ENST00000625017 386 ntBASIC6.45□□□□□ -1.38
CNOT4O95628 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CNOT4O95628 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.45□□□□□ -1.38
CNOT4O95628 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CNOT4O95628 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CNOT4O95628 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNOT4O95628 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms