Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NKX2-2O95096 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NKX2-2O95096 AC020923.1-201ENST00000624021 917 ntBASIC5.9□□□□□ -1.46
NKX2-2O95096 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.9□□□□□ -1.46
NKX2-2O95096 AL163152.1-201ENST00000642001 374 ntBASIC5.9□□□□□ -1.46
NKX2-2O95096 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
NKX2-2O95096 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 AC078880.4-201ENST00000617627 1749 ntBASIC5.9□□□□□ -1.47
NKX2-2O95096 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
NKX2-2O95096 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 AC093909.5-201ENST00000621839 1799 ntBASIC5.9□□□□□ -1.47
NKX2-2O95096 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.9□□□□□ -1.47
NKX2-2O95096 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
NKX2-2O95096 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-2O95096 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NKX2-2O95096 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC5.9□□□□□ -1.47
NKX2-2O95096 AL136984.1-201ENST00000607611 1893 ntBASIC5.9□□□□□ -1.47
NKX2-2O95096 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 NAMPTP1-201ENST00000440465 2514 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC006511.3-201ENST00000624929 1783 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 RNA5SP115-201ENST00000411160 107 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC007568.1-201ENST00000422912 471 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AL445528.1-201ENST00000426330 420 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 PA2G4P1-201ENST00000442248 1197 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 OR13K1P-201ENST00000444577 975 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 OR9A1P-202ENST00000484361 945 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 OR9N1P-201ENST00000491296 333 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.89□□□□□ -1.47
NKX2-2O95096 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.89□□□□□ -1.47
NKX2-2O95096 RNA5SP418-201ENST00000515951 117 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC124891.1-201ENST00000536322 519 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC008055.1-201ENST00000547032 609 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC012414.2-201ENST00000559474 187 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.89□□□□□ -1.47
NKX2-2O95096 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 AC022726.2-201ENST00000634673 547 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.89□□□□□ -1.47
NKX2-2O95096 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC068733.2-201ENST00000605434 1418 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NKX2-2O95096 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NKX2-2O95096 AC010329.1-201ENST00000593903 8328 ntBASIC5.89□□□□□ -1.47
NKX2-2O95096 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-2O95096 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NKX2-2O95096 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AC087565.3-202ENST00000642085 1603 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 MAPK10-270ENST00000641102 3538 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 GUCY1B2-204ENST00000531898 1979 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX2-2O95096 OLMALINC-203ENST00000641087 3779 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX2-2O95096 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX2-2O95096 MIR551B-201ENST00000384984 96 ntBASIC5.88□□□□□ -1.47
NKX2-2O95096 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX2-2O95096 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms