Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 FRG1EP-201ENST00000634469 770 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 AL353743.3-201ENST00000442109 1468 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 THAP12P5-201ENST00000405864 2275 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 CADPS-220ENST00000613879 1804 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 MIR188-201ENST00000385034 86 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UPK1BO75841 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 RN7SKP281-201ENST00000410472 352 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC009237.9-201ENST00000414800 347 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 AL133482.1-201ENST00000415988 498 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 RPL7AP72-201ENST00000417266 768 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC134879.1-201ENST00000426062 394 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AF274573.1-201ENST00000430535 494 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 MORF4-201ENST00000447135 971 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 MED28P7-201ENST00000456611 530 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 ACA64.4-201ENST00000459070 127 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC106774.2-201ENST00000510266 406 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC016559.1-201ENST00000511420 199 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 SCARNA18.2-201ENST00000516882 84 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC007068.2-201ENST00000543168 395 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 PLA2G1B-203ENST00000549767 562 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 AL132640.1-201ENST00000559594 619 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1BO75841 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC099777.1-201ENST00000603779 1070 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 MIR6085-201ENST00000618314 110 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC021766.1-201ENST00000624404 741 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 AC103703.1-201ENST00000634783 663 ntBASIC5.23□□□□□ -1.57
UPK1BO75841 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UPK1BO75841 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 MEST-203ENST00000378576 2180 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1BO75841 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1BO75841 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
UPK1BO75841 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
UPK1BO75841 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1BO75841 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1BO75841 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1BO75841 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1BO75841 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
UPK1BO75841 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
UPK1BO75841 TCP1P3-201ENST00000414406 1498 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
UPK1BO75841 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1BO75841 MYL6P5-201ENST00000412707 459 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 BMP2KL-201ENST00000414251 1225 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.22□□□□□ -1.57
UPK1BO75841 CYP4F34P-201ENST00000425951 481 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.22□□□□□ -1.57
UPK1BO75841 AL359265.1-201ENST00000440296 795 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 RPS4XP12-201ENST00000461747 709 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 USP9YP2-201ENST00000504503 1000 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1BO75841 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 USP9YP1-201ENST00000513521 1002 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 AC093281.1-201ENST00000514239 549 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 SEPT10P1-201ENST00000517342 1162 ntBASIC5.22□□□□□ -1.57
UPK1BO75841 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.22□□□□□ -1.57
UPK1BO75841 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1BO75841 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms