Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 CYP2G2P-201ENST00000594920 1485 ntBASIC5.76□□□□□ -1.49
ZIC3O60481 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ZIC3O60481 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ZIC3O60481 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
ZIC3O60481 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 CUBNP3-201ENST00000457461 1784 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AL731556.1-201ENST00000394628 3711 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 FAM32BP-201ENST00000344033 333 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 RNU6-386P-201ENST00000362650 107 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AL050305.1-201ENST00000399993 1230 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 OR1F12-201ENST00000402365 945 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AL139805.1-201ENST00000407837 289 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 NPM1P36-201ENST00000415681 835 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AL139158.1-201ENST00000424719 340 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC097721.1-201ENST00000427150 1253 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC094019.1-201ENST00000434678 472 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 GAPDHP59-201ENST00000435908 267 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC090589.1-201ENST00000473109 362 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 OR7E22P-201ENST00000478335 1035 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 RN7SL741P-201ENST00000482473 289 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 OR9A1P-202ENST00000484361 945 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 RN7SL714P-201ENST00000487050 298 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 RN7SL362P-201ENST00000494228 267 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC112484.3-201ENST00000505910 329 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC036111.2-201ENST00000533247 901 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC073916.1-201ENST00000545095 130 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.75□□□□□ -1.49
ZIC3O60481 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC122134.1-202ENST00000569111 1201 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.75□□□□□ -1.49
ZIC3O60481 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AL008723.3-201ENST00000608926 449 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AL135999.3-201ENST00000610501 812 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 uc_338.31-201ENST00000615595 186 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AL162233.1-201ENST00000620014 944 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AC016251.2-201ENST00000623393 3089 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ZIC3O60481 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.75□□□□□ -1.49
ZIC3O60481 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AKAP17BP-201ENST00000431706 2719 ntBASIC5.75□□□□□ -1.49
ZIC3O60481 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.75□□□□□ -1.49
ZIC3O60481 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ZIC3O60481 AC005618.1-201ENST00000606901 3148 ntBASIC5.74□□□□□ -1.49
ZIC3O60481 AC006213.6-201ENST00000623722 4179 ntBASIC5.74□□□□□ -1.49
ZIC3O60481 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC5.74□□□□□ -1.49
ZIC3O60481 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
ZIC3O60481 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ZIC3O60481 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ZIC3O60481 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.74□□□□□ -1.49
ZIC3O60481 RNA5SP279-201ENST00000365513 117 ntBASIC5.74□□□□□ -1.49
ZIC3O60481 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms