Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC134669.1-201ENST00000581275 672 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 AC063977.7-201ENST00000594454 337 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 AC004908.1-201ENST00000606572 541 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 AL121936.2-201ENST00000641935 662 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 MTND4P21-201ENST00000453886 1357 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.64□□□□□ -1.35
TRIM38O00635 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 AP002370.1-201ENST00000528055 1602 ntBASIC6.64□□□□□ -1.35
TRIM38O00635 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.64□□□□□ -1.35
TRIM38O00635 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRIM38O00635 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRIM38O00635 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 OR2M1P-201ENST00000318104 951 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 MIR365B-201ENST00000362317 111 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM38O00635 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM38O00635 RNA5SP474-201ENST00000391234 90 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 OR1F12-201ENST00000402365 945 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 RN7SKP129-201ENST00000410288 299 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 RAB9AP4-201ENST00000415230 609 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 ARAFP1-201ENST00000422172 605 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 ZFAND6P1-201ENST00000434138 605 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 AC092106.2-201ENST00000436597 487 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 SNRPBP1-201ENST00000443634 282 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM38O00635 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 AC104629.1-201ENST00000494226 508 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 AC122718.2-201ENST00000505325 591 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 SEC11B-201ENST00000518383 499 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TRIM38O00635 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.63□□□□□ -1.35
TRIM38O00635 AL359704.2-201ENST00000604335 521 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 AC009120.2-204ENST00000621548 2032 ntBASIC6.63□□□□□ -1.35
TRIM38O00635 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.63□□□□□ -1.35
TRIM38O00635 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TRIM38O00635 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM38O00635 AC027279.4-201ENST00000624371 2072 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.62□□□□□ -1.35
TRIM38O00635 AC009135.2-201ENST00000624136 1768 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC078880.4-201ENST00000617627 1749 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.62□□□□□ -1.35
TRIM38O00635 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 DOCK11P1-201ENST00000553480 5932 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
TRIM38O00635 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 MAPK10-379ENST00000642013 1385 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TRIM38O00635 RN7SKP199-201ENST00000410325 305 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 RNU4-64P-201ENST00000410795 131 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM38O00635 EEF1B2P8-201ENST00000414101 671 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 TRIM60P17-201ENST00000415181 719 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM38O00635 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.62□□□□□ -1.35
TRIM38O00635 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TRIM38O00635 MTND4P15-201ENST00000437913 1033 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 COL11A2P1-205ENST00000441798 676 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 PFN1P11-201ENST00000445829 389 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 CCNJP2-201ENST00000457810 1163 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 RN7SL413P-201ENST00000482700 297 ntBASIC6.62□□□□□ -1.35
TRIM38O00635 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms