Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC244100.4-201ENST00000617747 388 ntBASIC6.7□□□□□ -1.34
O00370 MIR6811-201ENST00000620409 58 ntBASIC6.7□□□□□ -1.34
O00370 MIR7159-201ENST00000620587 66 ntBASIC6.7□□□□□ -1.34
O00370 AL162377.2-201ENST00000624532 337 ntBASIC6.7□□□□□ -1.34
O00370 AC063952.1-203ENST00000634410 658 ntBASIC6.7□□□□□ -1.34
O00370 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
O00370 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
O00370 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.69□□□□□ -1.34
O00370 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.69□□□□□ -1.34
O00370 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
O00370 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 MAPK10-261ENST00000641050 3109 ntBASIC6.69□□□□□ -1.34
O00370 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
O00370 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
O00370 RN7SKP250-201ENST00000363924 321 ntBASIC6.69□□□□□ -1.34
O00370 AL360271.1-201ENST00000395679 510 ntBASIC6.69□□□□□ -1.34
O00370 PSMA6P1-201ENST00000400275 741 ntBASIC6.69□□□□□ -1.34
O00370 TMA16P2-201ENST00000413187 601 ntBASIC6.69□□□□□ -1.34
O00370 AC094019.1-201ENST00000434678 472 ntBASIC6.69□□□□□ -1.34
O00370 MRPS21P3-201ENST00000436696 262 ntBASIC6.69□□□□□ -1.34
O00370 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.69□□□□□ -1.34
O00370 RN7SL326P-201ENST00000477493 296 ntBASIC6.69□□□□□ -1.34
O00370 RN7SL568P-201ENST00000493069 298 ntBASIC6.69□□□□□ -1.34
O00370 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.69□□□□□ -1.34
O00370 OR4D12P-201ENST00000509361 911 ntBASIC6.69□□□□□ -1.34
O00370 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.69□□□□□ -1.34
O00370 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.69□□□□□ -1.34
O00370 IGKV2-19-201ENST00000518132 283 ntBASIC6.69□□□□□ -1.34
O00370 AP003033.2-201ENST00000528901 805 ntBASIC6.69□□□□□ -1.34
O00370 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.69□□□□□ -1.34
O00370 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
O00370 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.69□□□□□ -1.34
O00370 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.69□□□□□ -1.34
O00370 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.69□□□□□ -1.34
O00370 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 HNRNPCP1-201ENST00000556181 766 ntBASIC6.69□□□□□ -1.34
O00370 AC005632.2-201ENST00000564271 828 ntBASIC6.69□□□□□ -1.34
O00370 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.69□□□□□ -1.34
O00370 AC048341.3-201ENST00000619323 491 ntBASIC6.69□□□□□ -1.34
O00370 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.69□□□□□ -1.34
O00370 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
O00370 AP000641.1-201ENST00000531988 1639 ntBASIC6.68□□□□□ -1.34
O00370 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.68□□□□□ -1.34
O00370 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.68□□□□□ -1.34
O00370 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
O00370 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.68□□□□□ -1.34
O00370 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
O00370 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
O00370 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.68□□□□□ -1.34
O00370 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 RPS17P17-201ENST00000419392 409 ntBASIC6.68□□□□□ -1.34
O00370 THEM7P-201ENST00000419556 672 ntBASIC6.68□□□□□ -1.34
O00370 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 VN1R20P-201ENST00000425215 966 ntBASIC6.68□□□□□ -1.34
O00370 RPSAP32-201ENST00000432681 526 ntBASIC6.68□□□□□ -1.34
O00370 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
O00370 AL451063.1-201ENST00000450164 1133 ntBASIC6.68□□□□□ -1.34
O00370 YRDCP3-201ENST00000456507 480 ntBASIC6.68□□□□□ -1.34
O00370 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.68□□□□□ -1.34
O00370 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.68□□□□□ -1.34
O00370 MARK2P8-201ENST00000476069 952 ntBASIC6.68□□□□□ -1.34
O00370 RN7SL104P-201ENST00000498686 293 ntBASIC6.68□□□□□ -1.34
O00370 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 AC010343.2-201ENST00000510162 224 ntBASIC6.68□□□□□ -1.34
O00370 KHDC1P1-201ENST00000511053 508 ntBASIC6.68□□□□□ -1.34
O00370 BMS1P16-201ENST00000556075 1147 ntBASIC6.68□□□□□ -1.34
O00370 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.68□□□□□ -1.34
O00370 MIR3189-201ENST00000578735 73 ntBASIC6.68□□□□□ -1.34
O00370 AC009237.12-201ENST00000604755 742 ntBASIC6.68□□□□□ -1.34
O00370 AC024589.2-201ENST00000605642 1294 ntBASIC6.68□□□□□ -1.34
O00370 uc_338.29-201ENST00000615099 168 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms