Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AC073055.1-201ENST00000456901 1621 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.36□□□□□ -1.07
TMEM88BA6NKF7 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 IPO7P2-201ENST00000451446 1750 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 NACA3P-201ENST00000359690 648 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 RNA5SP27-201ENST00000363839 119 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 RNU6-83P-201ENST00000384568 112 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 SNORD65C-201ENST00000390962 71 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AL355379.1-201ENST00000405542 640 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 UBE2D3P4-201ENST00000441973 436 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC118469.1-201ENST00000442943 488 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC013787.1-201ENST00000460165 307 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 HPRT1P2-201ENST00000505250 544 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC113347.3-201ENST00000509113 148 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 SETP21-201ENST00000514799 892 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 RFPL4AP3-201ENST00000515267 345 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CYP2C60P-201ENST00000566088 139 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AL049840.5-201ENST00000602827 552 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC019131.2-201ENST00000609071 870 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AL354976.1-201ENST00000613843 387 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC067852.7-201ENST00000623270 535 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 ZNF663P-202ENST00000641770 1131 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AC036108.4-201ENST00000611654 2516 ntBASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.35□□□□□ -1.07
TMEM88BA6NKF7 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TMEM88BA6NKF7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms