Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 OR4G1P-202ENST00000641173 1788 ntBASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TCRBV7S3A2A0A539 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC022306.1-201ENST00000560489 1562 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC022164.1-201ENST00000568767 2673 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 MT-RNR1-201ENST00000389680 954 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 GTF3AP6-201ENST00000432585 986 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC016908.1-201ENST00000442571 1219 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 SEPT7P6-201ENST00000469999 1143 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AL355032.1-201ENST00000472981 438 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 RN7SL369P-201ENST00000477138 299 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 IGHV4-55-201ENST00000520889 368 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC092865.1-201ENST00000544395 1023 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC004232.2-201ENST00000574245 821 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC090079.2-201ENST00000575289 768 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 GLYATL1P2-202ENST00000588046 902 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AL713998.2-201ENST00000604538 1198 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AL591167.1-201ENST00000607321 456 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC104307.1-201ENST00000616142 196 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC087269.2-201ENST00000641764 975 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 AC024341.1-201ENST00000526444 1552 ntBASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.35□□□□□ -1.39
TCRBV7S3A2A0A539 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 KYNUP2-201ENST00000582280 1329 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 OR6K3-202ENST00000368146 996 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 TRAV35-201ENST00000390462 330 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 ARSFP1-201ENST00000398758 477 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC002127.1-201ENST00000421305 225 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 BX679664.2-201ENST00000439282 283 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 MORF4-201ENST00000447135 971 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL356390.1-201ENST00000455684 397 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AL445687.2-201ENST00000458156 728 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 GM2AP2-201ENST00000491764 562 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC010343.2-201ENST00000510162 224 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 RNA5SP206-201ENST00000516703 121 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC084851.2-201ENST00000530377 364 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 RPA2P3-201ENST00000533268 770 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 OR4A6P-201ENST00000534364 970 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC009268.1-201ENST00000561352 1203 ntBASIC6.34□□□□□ -1.39
TCRBV7S3A2A0A539 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms