Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MIR99A-201ENST00000384906 81 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AL451061.1-201ENST00000407887 862 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 MIR1231-201ENST00000408101 92 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 YWHAZP5-201ENST00000419975 730 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AL157884.1-201ENST00000424561 454 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC073410.1-201ENST00000435125 589 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 RPSAP41-201ENST00000439695 860 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 UBBP5-201ENST00000446970 266 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 OSTCP1-201ENST00000455507 450 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 RN7SL284P-201ENST00000498823 275 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC111000.5-201ENST00000506559 1178 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 CARSP2-201ENST00000520688 277 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC136777.2-201ENST00000522979 358 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 OR4C1P-201ENST00000530880 937 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC244502.2-201ENST00000543361 851 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 NPM1P5-201ENST00000557228 838 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 WDR45BP1-201ENST00000583470 1029 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 MIR6736-201ENST00000616799 59 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 BCORP1-203ENST00000513194 5093 ntBASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RCL1Q9Y2P8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 SAMM50P1-201ENST00000455403 1399 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 NPM1P31-201ENST00000399021 764 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 FECHP1-201ENST00000431896 1214 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 SUMO2P4-201ENST00000504193 276 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 HNRNPCP8-201ENST00000528764 888 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 OR6M2P-201ENST00000529831 871 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 PSMC1P8-201ENST00000536820 1296 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL049779.3-201ENST00000557141 606 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 PRR13P3-201ENST00000603578 376 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL512356.3-201ENST00000623005 461 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 MIR665-201ENST00000635949 72 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC079248.1-201ENST00000427568 1546 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL442128.2-201ENST00000620246 1824 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AC232271.1-201ENST00000602455 2715 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RCL1Q9Y2P8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.05□□□□□ -1.6
RCL1Q9Y2P8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RCL1Q9Y2P8 AL137141.1-201ENST00000624622 4836 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms