Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AL589993.1-201ENST00000407450 2524 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 RNA5SP156-201ENST00000410250 110 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AL389925.1-201ENST00000432257 728 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 GAPDHP23-201ENST00000444823 993 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 HLA-DPA3-207ENST00000454398 229 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 RNA5SP434-201ENST00000516647 121 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 TRIM77BP-201ENST00000524985 1119 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AL445649.1-201ENST00000615941 691 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC011416.1-201ENST00000514947 1732 ntBASIC6.73□□□□□ -1.33
NXF3Q9H4D5 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NXF3Q9H4D5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC022325.1-201ENST00000502748 2199 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC024651.2-201ENST00000562480 2098 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LYPLA1P3-201ENST00000402650 695 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 CYP4F30P-202ENST00000420048 405 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC090568.1-201ENST00000509499 856 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC006499.4-201ENST00000510947 694 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 NANOGNBP2-201ENST00000544753 553 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AL513218.1-201ENST00000606527 391 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.72□□□□□ -1.33
NXF3Q9H4D5 AL731556.1-201ENST00000394628 3711 ntBASIC6.72□□□□□ -1.33
NXF3Q9H4D5 PSG10P-201ENST00000501199 1500 ntBASIC6.71□□□□□ -1.33
NXF3Q9H4D5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NXF3Q9H4D5 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 MIR433-201ENST00000384837 93 ntBASIC6.71□□□□□ -1.34
NXF3Q9H4D5 AC016724.1-201ENST00000453215 421 ntBASIC6.71□□□□□ -1.34
NXF3Q9H4D5 CST12P-201ENST00000457644 362 ntBASIC6.71□□□□□ -1.34
NXF3Q9H4D5 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
NXF3Q9H4D5 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms