Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC007066.1-201ENST00000392902 381 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AL161787.1-201ENST00000401543 174 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC096632.2-201ENST00000438139 1239 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 ACTR3P2-201ENST00000439585 1257 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 TBL1YP1-201ENST00000440297 1026 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 BRK1P2-201ENST00000442875 223 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 RPL39P6-201ENST00000448289 150 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 SUMO1P2-201ENST00000452524 304 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 FGF7P3-201ENST00000454645 303 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC233279.1-201ENST00000455300 423 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 RPL34P22-201ENST00000468193 318 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC105918.1-201ENST00000474399 838 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC105914.1-201ENST00000511798 226 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 RNU6-964P-201ENST00000516524 69 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 OR4C9P-201ENST00000532368 925 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC008147.3-201ENST00000548666 354 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 OR7A8P-201ENST00000595427 913 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AL136295.6-201ENST00000610486 658 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 MFSD8-245ENST00000641743 948 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 OR2B11-203ENST00000641527 4545 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 RARSP1-201ENST00000542842 1418 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 AL359694.2-201ENST00000567753 1615 ntBASIC8.87□□□□□ -0.99
LRCH3Q96II8 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
LRCH3Q96II8 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LRCH3Q96II8 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 HSPA8P17-201ENST00000427029 1382 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AL034370.1-201ENST00000397254 1590 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 GOLGA8B-201ENST00000342314 4335 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 NBPF6-202ENST00000495380 2494 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 Y_RNA.145-201ENST00000363527 102 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 SNORA4.1-201ENST00000364263 144 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 RNU6-784P-201ENST00000384330 106 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
LRCH3Q96II8 CAPNS1P1-201ENST00000401029 633 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AIMP1P1-201ENST00000418670 937 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 VN1R20P-201ENST00000425215 966 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 OR5AW1P-201ENST00000426334 1006 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AF305872.1-201ENST00000485217 471 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC021146.2-201ENST00000504736 556 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 BTF3P13-201ENST00000513224 490 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC017037.2-201ENST00000513850 890 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC138356.2-201ENST00000521192 667 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AP005597.4-201ENST00000526762 229 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AP000662.1-201ENST00000530952 487 ntBASIC8.86□□□□□ -0.99
LRCH3Q96II8 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.86□□□□□ -0.99
LRCH3Q96II8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms