Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 AL353743.3-201ENST00000442109 1468 ntBASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRUB1Q8WWH5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC011416.1-201ENST00000514947 1732 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RNA5SP355-201ENST00000365317 135 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RN7SKP69-201ENST00000365390 305 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AL079341.1-201ENST00000404701 1207 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC099670.2-201ENST00000435130 321 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RPS3AP38-201ENST00000435889 763 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RN7SL868P-201ENST00000485915 303 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RPL7L1P7-201ENST00000509986 724 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 MIR4800-201ENST00000537353 80 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 BMS1P16-201ENST00000556075 1147 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC005858.3-201ENST00000624756 589 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
TRUB1Q8WWH5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC100810.3-201ENST00000633189 2240 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 BCORP1-203ENST00000513194 5093 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL445238.1-204ENST00000400311 463 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 RN7SKP91-201ENST00000410852 288 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AHCYP8-201ENST00000425108 209 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 IGLV3-4-201ENST00000432300 244 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL731534.1-201ENST00000434711 269 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 MORF4-201ENST00000447135 971 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 PRELID1P3-201ENST00000450055 643 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 CCNJP1-201ENST00000450600 1149 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 RAB28P2-201ENST00000454299 641 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC112187.1-201ENST00000455837 479 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AL133480.2-201ENST00000456723 487 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 UOX-201ENST00000471089 899 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 OR4A43P-201ENST00000532938 908 ntBASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.67□□□□□ -1.5
TRUB1Q8WWH5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms