Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 XKRY2-202ENST00000623874 1581 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 XKRY-202ENST00000624960 1581 ntBASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLHC1Q8NHS4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AP002512.4-202ENST00000641599 4530 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AL451046.1-201ENST00000406097 534 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC073594.1-201ENST00000462065 364 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC063955.1-201ENST00000462872 685 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 RN7SL790P-201ENST00000474043 298 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 RNA5SP418-201ENST00000515951 117 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 BCAS2P1-201ENST00000528022 632 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC009729.1-201ENST00000548873 1133 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 RPL3P13-201ENST00000550415 216 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC023968.1-201ENST00000560719 475 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 MIR3159-201ENST00000584572 74 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AL352984.2-202ENST00000613699 155 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CLHC1Q8NHS4 MIR7159-201ENST00000620587 66 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC007204.1-201ENST00000621794 555 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC099654.11-201ENST00000638857 294 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 AC022306.1-201ENST00000560489 1562 ntBASIC6□□□□□ -1.45
CLHC1Q8NHS4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLHC1Q8NHS4 KYNUP2-201ENST00000582280 1329 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC096921.2-201ENST00000561507 1916 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC116158.1-201ENST00000560231 2129 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC005225.5-201ENST00000623547 2225 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 NR1H5P-201ENST00000452683 1377 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 HDAC1P2-201ENST00000453661 1398 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AL033519.1-201ENST00000407266 307 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 MIR1266-201ENST00000408125 84 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 HMGA1P8-201ENST00000414130 321 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AL139184.1-202ENST00000422303 222 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 REREP1Y-201ENST00000422655 198 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 OR5W1P-201ENST00000423705 938 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 REREP2Y-201ENST00000439103 200 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 GAPDHP37-201ENST00000442317 968 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC079922.1-201ENST00000443291 359 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC093325.1-201ENST00000508378 326 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 MINOS1P4-201ENST00000515470 318 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 RNU6-964P-201ENST00000516524 69 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 OR4A6P-201ENST00000534364 970 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC092865.1-201ENST00000544395 1023 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 MIR4420-201ENST00000583944 77 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC005332.4-201ENST00000592752 579 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 RPL7AP69-201ENST00000595306 806 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AL390877.1-201ENST00000605704 214 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 AC003992.1-201ENST00000635364 557 ntBASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms