Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL353743.3-201ENST00000442109 1468 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AOX3P-204ENST00000491025 2107 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 RNU1-5P-201ENST00000362684 144 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC092634.1-201ENST00000366505 199 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 MIR433-201ENST00000384837 93 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 RN7SKP221-201ENST00000410420 301 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 RNA5SP155-201ENST00000411154 129 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL354868.1-201ENST00000417077 482 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL139184.1-202ENST00000422303 222 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 KATNBL1P2-201ENST00000433311 835 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL355032.1-201ENST00000472981 438 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 RNA5SP96-201ENST00000516041 107 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC023968.1-201ENST00000560719 475 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 AC009831.5-201ENST00000624000 3189 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 USP9YP3-201ENST00000434481 1766 ntBASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC50Q8IVM0 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 FANCD2P2-201ENST00000437591 1400 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC010894.1-201ENST00000313760 361 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RNU1-84P-201ENST00000365447 164 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RNU11-6P-201ENST00000391127 133 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC026310.1-201ENST00000396004 378 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 HMGN1P32-201ENST00000441744 256 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC079922.1-201ENST00000443291 359 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL022319.1-201ENST00000458183 1167 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RPL5P33-201ENST00000487833 905 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC093325.1-201ENST00000508378 326 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RPL3P13-201ENST00000550415 216 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC023080.1-201ENST00000551663 931 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 TPRX1P1-201ENST00000557620 319 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RN7SL32P-201ENST00000580514 281 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 RPL7AP69-201ENST00000595306 806 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AC073046.2-201ENST00000604756 527 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL078624.2-201ENST00000605063 554 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL021368.3-201ENST00000607119 578 ntBASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC50Q8IVM0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms