Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SCXQ7RTU7 DDX43P1-201ENST00000510713 1763 ntBASIC4.25□□□□□ -1.73
SCXQ7RTU7 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 PPIAP24-201ENST00000328558 471 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SNORA38B-201ENST00000363524 131 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 MIR541-201ENST00000401360 84 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 RANP7-201ENST00000418085 644 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 COL11A2P1-205ENST00000441798 676 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC128716.1-201ENST00000475129 166 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 RN7SL382P-201ENST00000482631 282 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC012123.2-201ENST00000485809 248 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 PPP1R11P1-201ENST00000486095 376 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC106822.1-201ENST00000502647 526 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC113367.2-201ENST00000505749 160 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC021220.1-201ENST00000507445 630 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC009729.1-201ENST00000548873 1133 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SNORD96A-201ENST00000606577 79 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC021422.1-201ENST00000621212 473 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AC073593.1-201ENST00000624500 411 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 AL121936.2-201ENST00000641935 662 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SMG1P5-202ENST00000529428 4219 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 SMG1P2-201ENST00000566127 4221 ntBASIC4.24□□□□□ -1.73
SCXQ7RTU7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC4.24□□□□□ -1.73
SCXQ7RTU7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SCXQ7RTU7 PROS2P-201ENST00000474651 1951 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 NEK2P4-201ENST00000425793 1329 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL512310.3-201ENST00000547023 1335 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC119674.1-204ENST00000641348 1343 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 RNA5SP65-201ENST00000363166 119 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 RNA5SP485-201ENST00000365053 119 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 RPL23AP18-201ENST00000416139 468 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.23□□□□□ -1.73
SCXQ7RTU7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SCXQ7RTU7 CCNJP1-201ENST00000450600 1149 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 CCNJP2-201ENST00000457810 1163 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 RN7SL39P-201ENST00000462264 297 ntBASIC4.23□□□□□ -1.73
SCXQ7RTU7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms