Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC093664.1-201ENST00000511779 289 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC131935.1-201ENST00000524621 333 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 OR9G2P-201ENST00000533326 880 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 OR4A6P-201ENST00000534364 970 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC090115.2-201ENST00000548060 883 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC090616.1-201ENST00000583895 447 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AL591222.2-201ENST00000604443 754 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AL352984.2-202ENST00000613699 155 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC243960.7-201ENST00000623532 707 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 LINC02495-203ENST00000636704 242 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AC130360.2-201ENST00000533477 1556 ntBASIC5.76□□□□□ -1.49
NHLRC1Q6VVB1 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 SAGE3P-201ENST00000619800 1635 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 SNORD35A-201ENST00000363389 86 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 SNORA70.9-201ENST00000384370 135 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 OR2W4P-201ENST00000406496 926 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 MIR1266-201ENST00000408125 84 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 UBTFL2-201ENST00000411859 1191 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 VN1R31P-201ENST00000417498 730 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AL139184.1-202ENST00000422303 222 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 UBE2V2P3-201ENST00000433562 437 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 WDR82P2-201ENST00000444540 928 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AL157385.1-201ENST00000446973 268 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC147055.1-201ENST00000509261 750 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 RN7SKP248-201ENST00000516278 305 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC011270.1-201ENST00000558606 583 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 HMGN2P47-201ENST00000559378 272 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 MIR4433B-201ENST00000581329 102 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC073046.2-201ENST00000604756 527 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 MIR6885-201ENST00000612241 66 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 MIR6085-201ENST00000618314 110 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 TCL6_3.1-201ENST00000619064 137 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC211486.4-201ENST00000621495 113 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 CASC19-238ENST00000641523 1558 ntBASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NHLRC1Q6VVB1 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 MAPK10-287ENST00000641217 3037 ntBASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NHLRC1Q6VVB1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms