Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDCA8Q53HL2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC9.39□□□□□ -0.91
CDCA8Q53HL2 AC096992.2-201ENST00000609553 1684 ntBASIC9.39□□□□□ -0.91
CDCA8Q53HL2 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDCA8Q53HL2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CDCA8Q53HL2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC234772.1-201ENST00000377927 937 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 RNU6-354P-201ENST00000383862 107 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 RNU6-610P-201ENST00000384264 107 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 BX664727.1-201ENST00000416024 466 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC008753.1-201ENST00000423096 284 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC064862.5-201ENST00000440618 334 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 RNFT1P2-201ENST00000443064 757 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AL358794.1-201ENST00000445689 381 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 OR6K5P-201ENST00000447050 945 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC004263.1-201ENST00000479327 332 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC074386.1-206ENST00000487102 761 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 RN7SL37P-201ENST00000490461 307 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 SNRPCP11-201ENST00000492453 205 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AL390198.2-201ENST00000510553 222 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 GAS5-AS1-201ENST00000602767 694 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC010333.3-201ENST00000615100 402 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC120057.5-201ENST00000623840 154 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 TSHZ2-205ENST00000626626 670 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC027559.1-201ENST00000636288 271 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 PRNCR1-201ENST00000635449 12727 ntBASIC9.38□□□□□ -0.91
CDCA8Q53HL2 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CDCA8Q53HL2 AC010132.4-201ENST00000569883 1368 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 PA2G4P1-201ENST00000442248 1197 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 HMGB1P26-201ENST00000452520 628 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RPL26P30-201ENST00000453533 435 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RARRES2P3-201ENST00000457739 473 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RN7SL393P-201ENST00000463588 296 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 FABP5P6-201ENST00000510588 409 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AL445383.1-201ENST00000554689 874 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 HNRNPA1P74-201ENST00000560782 835 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC005479.3-201ENST00000602790 431 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RNU4-5P-201ENST00000607255 135 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AP003119.3-201ENST00000566747 4192 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 AL023806.3-201ENST00000638502 2704 ntBASIC9.37□□□□□ -0.91
CDCA8Q53HL2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CDCA8Q53HL2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDCA8Q53HL2 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDCA8Q53HL2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CDCA8Q53HL2 AL513185.3-201ENST00000433335 1300 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms