Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RBMY1HP-201ENST00000382759 1389 ntBASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 CTAGE11P-201ENST00000451540 2353 ntBASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
SHROOM1Q2M3G4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 RNA5SP435-201ENST00000364044 108 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AL512422.1-201ENST00000407033 553 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC106800.3-201ENST00000511389 308 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 MIR6809-201ENST00000612189 116 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 MAPK10-323ENST00000641493 3207 ntBASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SHROOM1Q2M3G4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AC105749.1-201ENST00000631338 2008 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 BIN2P1-201ENST00000504996 1530 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AC024587.1-201ENST00000505925 2157 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 OR11H13P-201ENST00000359695 979 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MTND6P12-201ENST00000428247 522 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 NDUFS5P5-201ENST00000437256 321 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 GAPDHP23-201ENST00000444823 993 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MORF4-201ENST00000447135 971 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 RN7SL284P-201ENST00000498823 275 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MTATP6P1-201ENST00000514057 681 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 RNU4ATAC-201ENST00000580972 127 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AL132640.3-201ENST00000630473 177 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AF287957.1-201ENST00000607368 1595 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 AC137056.2-201ENST00000624055 1958 ntBASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
SHROOM1Q2M3G4 MTCO1P28-201ENST00000574177 1528 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 AC011416.1-201ENST00000514947 1732 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 SNORA43.1-201ENST00000364863 140 ntBASIC7.27□□□□□ -1.25
SHROOM1Q2M3G4 CDY17P-201ENST00000414121 1282 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms