Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNU7-125P-201ENST00000458760 62 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC005410.1-202ENST00000460347 485 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC095052.1-201ENST00000509955 863 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC092593.2-201ENST00000513866 913 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 HMGN1P26-201ENST00000558737 303 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC027796.1-201ENST00000575593 512 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 IGLJCOR18-201ENST00000584002 424 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 MIR4719-201ENST00000585233 84 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC005034.4-201ENST00000603612 899 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AP003973.1-201ENST00000604639 691 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.59□□□□□ -1.19
SOX4Q06945 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 RN7SKP299-201ENST00000606679 301 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AC025588.4-201ENST00000615802 908 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC022079.2-201ENST00000619739 566 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC091931.1-201ENST00000623488 728 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SOX4Q06945 CASC19-274ENST00000642018 970 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SOX4Q06945 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SOX4Q06945 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SOX4Q06945 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 AL049737.1-201ENST00000413920 1403 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC092104.1-201ENST00000497346 1441 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 CDY19P-201ENST00000411668 1613 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 CDY18P-201ENST00000438294 1609 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
SOX4Q06945 TTC3P1-201ENST00000399586 6081 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 AC091544.5-201ENST00000620192 3815 ntBASIC7.59□□□□□ -1.19
SOX4Q06945 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SOX4Q06945 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SOX4Q06945 AC073544.1-201ENST00000600110 1595 ntBASIC7.59□□□□□ -1.2
SOX4Q06945 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SOX4Q06945 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 AL121949.2-201ENST00000403446 1548 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 MAPK10-377ENST00000642006 2752 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 SNORD116-12-201ENST00000384468 92 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 RNA5SP176-201ENST00000390956 110 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SOX4Q06945 AL133264.1-201ENST00000407157 562 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AL133325.1-201ENST00000421090 382 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC011233.1-201ENST00000422812 283 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 DEFB130D-201ENST00000426866 237 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC018804.1-201ENST00000430381 618 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 PUDPP2-201ENST00000431423 643 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AC009518.3-201ENST00000438972 253 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 CUBNP2-201ENST00000443534 1139 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC093899.1-201ENST00000457984 376 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AL157777.1-201ENST00000468100 304 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SOX4Q06945 RPL9P15-201ENST00000491096 532 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC021146.8-201ENST00000507455 733 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 LTV1P1-201ENST00000510683 1237 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.58□□□□□ -1.2
SOX4Q06945 RN7SKP34-201ENST00000516142 244 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 RNU6-964P-201ENST00000516524 69 ntBASIC7.58□□□□□ -1.2
SOX4Q06945 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.58□□□□□ -1.2
SOX4Q06945 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC7.58□□□□□ -1.2
SOX4Q06945 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms