Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 EMC3-AS1-205ENST00000438698 534 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC099670.1-201ENST00000455141 783 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 RPL7L1P3-201ENST00000455249 689 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 RBMY2HP-201ENST00000457961 720 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 AL355032.1-201ENST00000472981 438 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC008945.1-201ENST00000505144 499 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 RNU4ATAC-201ENST00000580972 127 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 PRELID3BP3-201ENST00000584963 545 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC020916.2-201ENST00000591242 360 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AL589765.6-201ENST00000601909 549 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 AC022164.1-201ENST00000568767 2673 ntBASIC5.97□□□□□ -1.45
HMGCS1Q01581 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
HMGCS1Q01581 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HMGCS1Q01581 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
HMGCS1Q01581 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 RN7SKP121-201ENST00000410842 305 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC015977.1-201ENST00000418887 292 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 FAM183DP-201ENST00000421987 399 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 OSTCP4-201ENST00000424397 449 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC016027.5-201ENST00000427227 210 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AL354707.3-201ENST00000427308 331 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC112492.2-201ENST00000432774 1030 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AL445687.2-201ENST00000458156 728 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 RN7SL326P-201ENST00000477493 296 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 RPL12P31-201ENST00000478433 450 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 MTND6P8-201ENST00000503471 522 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 OR4D12P-201ENST00000509361 911 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC135983.3-201ENST00000528049 1226 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC025283.1-201ENST00000572039 734 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC026898.1-201ENST00000586404 571 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 DYNLL1P1-201ENST00000595442 269 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AL591167.1-201ENST00000607321 456 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC022106.1-201ENST00000612834 766 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 AC015819.1-201ENST00000613588 663 ntBASIC5.96□□□□□ -1.46
HMGCS1Q01581 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HMGCS1Q01581 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.96□□□□□ -1.46
HMGCS1Q01581 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 RNA5SP485-201ENST00000365053 119 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 SNORA64.3-201ENST00000365647 134 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms