Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 IGHV3-57-201ENST00000520143 280 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AP003115.1-201ENST00000569849 463 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CL1P78423 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AL953862.2-201ENST00000603089 820 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC005277.2-201ENST00000617898 390 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 AC004836.1-201ENST00000623032 634 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.26□□□□□ -1.57
CX3CL1P78423 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 CASC19-228ENST00000641414 1684 ntBASIC5.26□□□□□ -1.57
CX3CL1P78423 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.26□□□□□ -1.57
CX3CL1P78423 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.26□□□□□ -1.57
CX3CL1P78423 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CX3CL1P78423 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 PSMC1P6-201ENST00000477233 1319 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 PSMC1P4-201ENST00000515236 1327 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC024341.1-201ENST00000526444 1552 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 ICE2P1-201ENST00000512800 1849 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 RBPJP6-201ENST00000411556 1431 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CL1P78423 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CL1P78423 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC092634.1-201ENST00000366505 199 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC019178.1-201ENST00000392337 440 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC026310.1-201ENST00000396004 378 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 FDPSP5-201ENST00000399474 1057 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AMZ2P2-201ENST00000406819 1057 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AL353133.1-201ENST00000407695 401 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CX3CL1P78423 RN7SKP205-201ENST00000410999 307 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL929472.1-201ENST00000417484 429 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL139415.1-201ENST00000424862 352 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC245884.2-201ENST00000426257 404 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 FAR1P1-201ENST00000427163 934 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 MTCO1P51-201ENST00000427672 1060 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 Z68868.1-201ENST00000429048 544 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC083855.1-201ENST00000440041 258 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 RPS19P6-201ENST00000441327 433 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CX3CL1P78423 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 CTSLP6-201ENST00000458273 1002 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 RPS3AP49-201ENST00000472161 790 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC105918.1-201ENST00000474399 838 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC128716.1-201ENST00000475129 166 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC099340.1-201ENST00000475247 599 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC009567.2-201ENST00000502989 349 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.25□□□□□ -1.57
CX3CL1P78423 SNORA58-201ENST00000505219 137 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 AC090115.2-201ENST00000548060 883 ntBASIC5.25□□□□□ -1.57
CX3CL1P78423 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.25□□□□□ -1.57
CX3CL1P78423 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms