Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 KHDC1P1-201ENST00000511053 508 ntBASIC6.47□□□□□ -1.37
CDH6P55285 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.47□□□□□ -1.37
CDH6P55285 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.47□□□□□ -1.37
CDH6P55285 DYNLL1P1-201ENST00000595442 269 ntBASIC6.47□□□□□ -1.37
CDH6P55285 NDUFB9P1-201ENST00000604683 510 ntBASIC6.47□□□□□ -1.37
CDH6P55285 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.47□□□□□ -1.37
CDH6P55285 AC015819.1-201ENST00000613588 663 ntBASIC6.47□□□□□ -1.37
CDH6P55285 AC010998.3-201ENST00000613871 631 ntBASIC6.47□□□□□ -1.37
CDH6P55285 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.47□□□□□ -1.37
CDH6P55285 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CDH6P55285 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
CDH6P55285 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDH6P55285 AL133243.2-201ENST00000610331 1621 ntBASIC6.47□□□□□ -1.37
CDH6P55285 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDH6P55285 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH6P55285 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
CDH6P55285 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.46□□□□□ -1.37
CDH6P55285 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CDH6P55285 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CDH6P55285 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH6P55285 MIR191-201ENST00000384873 92 ntBASIC6.46□□□□□ -1.38
CDH6P55285 RNA5SP251-201ENST00000410614 137 ntBASIC6.46□□□□□ -1.38
CDH6P55285 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH6P55285 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 KATNBL1P2-201ENST00000433311 835 ntBASIC6.46□□□□□ -1.38
CDH6P55285 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH6P55285 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH6P55285 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 AL133351.3-201ENST00000454998 193 ntBASIC6.46□□□□□ -1.38
CDH6P55285 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.46□□□□□ -1.38
CDH6P55285 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH6P55285 AP001858.2-201ENST00000536213 601 ntBASIC6.46□□□□□ -1.38
CDH6P55285 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.46□□□□□ -1.38
CDH6P55285 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH6P55285 LINC01613-201ENST00000561476 2780 ntBASIC6.46□□□□□ -1.38
CDH6P55285 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.46□□□□□ -1.38
CDH6P55285 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 AC018659.2-201ENST00000624690 715 ntBASIC6.46□□□□□ -1.38
CDH6P55285 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 OR7A1P-202ENST00000641542 1158 ntBASIC6.46□□□□□ -1.38
CDH6P55285 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CDH6P55285 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CDH6P55285 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CDH6P55285 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.46□□□□□ -1.38
CDH6P55285 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH6P55285 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH6P55285 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH6P55285 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CDH6P55285 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH6P55285 RNU1-49P-201ENST00000363468 159 ntBASIC6.45□□□□□ -1.38
CDH6P55285 RNA5SP346-201ENST00000363541 121 ntBASIC6.45□□□□□ -1.38
CDH6P55285 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH6P55285 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
CDH6P55285 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 PSMA6P1-201ENST00000400275 741 ntBASIC6.45□□□□□ -1.38
CDH6P55285 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AK3P5-201ENST00000432033 519 ntBASIC6.45□□□□□ -1.38
CDH6P55285 LDHAP2-201ENST00000437325 985 ntBASIC6.45□□□□□ -1.38
CDH6P55285 PPIAP10-201ENST00000438675 458 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CDH6P55285 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 AC112187.1-201ENST00000455837 479 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms