Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CDH4P55283 MTND5P12-201ENST00000502851 1449 ntBASIC6.42□□□□□ -1.38
CDH4P55283 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 MIR433-201ENST00000384837 93 ntBASIC6.42□□□□□ -1.38
CDH4P55283 RNU11-6P-201ENST00000391127 133 ntBASIC6.42□□□□□ -1.38
CDH4P55283 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 AL445238.1-204ENST00000400311 463 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH4P55283 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 AC009237.1-201ENST00000442127 744 ntBASIC6.42□□□□□ -1.38
CDH4P55283 RPSAP40-201ENST00000442343 891 ntBASIC6.42□□□□□ -1.38
CDH4P55283 OR13K1P-201ENST00000444577 975 ntBASIC6.42□□□□□ -1.38
CDH4P55283 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AL451063.1-201ENST00000450164 1133 ntBASIC6.42□□□□□ -1.38
CDH4P55283 RPL34P33-201ENST00000486062 334 ntBASIC6.42□□□□□ -1.38
CDH4P55283 Vault.2-201ENST00000516519 98 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.42□□□□□ -1.38
CDH4P55283 AC084121.1-201ENST00000533882 835 ntBASIC6.42□□□□□ -1.38
CDH4P55283 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.42□□□□□ -1.38
CDH4P55283 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.42□□□□□ -1.38
CDH4P55283 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 AL845552.1-201ENST00000556820 323 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AC026826.3-201ENST00000561747 158 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AC018558.5-201ENST00000565840 952 ntBASIC6.42□□□□□ -1.38
CDH4P55283 MIR4502-201ENST00000580432 81 ntBASIC6.42□□□□□ -1.38
CDH4P55283 MIR4701-201ENST00000583094 63 ntBASIC6.42□□□□□ -1.38
CDH4P55283 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 AP001823.1-201ENST00000604056 1003 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AC097641.3-201ENST00000613523 464 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AP001052.1-201ENST00000626421 99 ntBASIC6.42□□□□□ -1.38
CDH4P55283 AC073488.6-201ENST00000632293 754 ntBASIC6.42□□□□□ -1.38
CDH4P55283 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CDH4P55283 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH4P55283 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CDH4P55283 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CDH4P55283 AL033543.1-201ENST00000623440 13454 ntBASIC6.42□□□□□ -1.38
CDH4P55283 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 OR11H13P-201ENST00000359695 979 ntBASIC6.41□□□□□ -1.38
CDH4P55283 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AL354707.3-201ENST00000427308 331 ntBASIC6.41□□□□□ -1.38
CDH4P55283 MRPS21P3-201ENST00000436696 262 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AL355355.1-201ENST00000442900 793 ntBASIC6.41□□□□□ -1.38
CDH4P55283 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.41□□□□□ -1.38
CDH4P55283 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 AC090958.1-201ENST00000511122 351 ntBASIC6.41□□□□□ -1.38
CDH4P55283 RNA5SP400-201ENST00000517155 111 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.41□□□□□ -1.38
CDH4P55283 MIR4271-201ENST00000582451 67 ntBASIC6.41□□□□□ -1.38
CDH4P55283 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.41□□□□□ -1.38
CDH4P55283 AL591167.1-201ENST00000607321 456 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AC073389.3-201ENST00000609434 935 ntBASIC6.41□□□□□ -1.38
CDH4P55283 AC005899.7-201ENST00000618199 588 ntBASIC6.41□□□□□ -1.38
CDH4P55283 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.41□□□□□ -1.38
CDH4P55283 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDH4P55283 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.41□□□□□ -1.38
CDH4P55283 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms