Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.48□□□□□ -1.37
LIMK1P53667 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LIMK1P53667 DDX18P6-201ENST00000450119 1997 ntBASIC6.48□□□□□ -1.37
LIMK1P53667 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 MIR937-201ENST00000401271 86 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC244033.1-201ENST00000426826 870 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK1P53667 VPS25P1-201ENST00000455691 508 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC105420.1-201ENST00000504389 582 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK1P53667 RPL7L1P4-201ENST00000513004 707 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 PRMT5P1-201ENST00000514351 598 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 SNORD46.2-201ENST00000516021 102 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 RNA5SP271-201ENST00000516700 88 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 RN7SKP35-201ENST00000517210 151 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 IGKV3D-25-201ENST00000519599 235 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC008429.4-201ENST00000521201 182 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AP004607.6-201ENST00000525033 1202 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC008055.1-201ENST00000547032 609 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 AC079905.1-201ENST00000549280 475 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC018558.5-201ENST00000565840 952 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.47□□□□□ -1.37
LIMK1P53667 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 AC126175.1-201ENST00000617041 758 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 AC069234.4-201ENST00000621276 412 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 AC022905.1-201ENST00000503430 3048 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.47□□□□□ -1.37
LIMK1P53667 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 AC105749.1-201ENST00000631338 2008 ntBASIC6.47□□□□□ -1.37
LIMK1P53667 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
LIMK1P53667 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
LIMK1P53667 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
LIMK1P53667 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.46□□□□□ -1.37
LIMK1P53667 AC074141.1-201ENST00000588129 2995 ntBASIC6.46□□□□□ -1.37
LIMK1P53667 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.46□□□□□ -1.37
LIMK1P53667 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.46□□□□□ -1.37
LIMK1P53667 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIMK1P53667 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
LIMK1P53667 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIMK1P53667 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIMK1P53667 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
LIMK1P53667 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LIMK1P53667 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 SUGT1P2-201ENST00000379452 992 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 SNORA51.9-201ENST00000384295 124 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
LIMK1P53667 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 MTND2P12-201ENST00000417560 1252 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 CDY8P-201ENST00000428380 1279 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.46□□□□□ -1.38
LIMK1P53667 AL161636.2-201ENST00000445179 927 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 SUMO2P1-206ENST00000445436 284 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 CDY20P-201ENST00000447528 1279 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.46□□□□□ -1.38
LIMK1P53667 BZW1P1-201ENST00000454901 1240 ntBASIC6.46□□□□□ -1.38
LIMK1P53667 AC023194.2-201ENST00000465398 406 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms