Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 PPIAP24-201ENST00000328558 471 ntBASIC6.8□□□□□ -1.32
COPAP53621 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 CXADRP1-201ENST00000398098 1095 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL359694.1-201ENST00000403247 604 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 AL589655.1-201ENST00000405398 482 ntBASIC6.8□□□□□ -1.32
COPAP53621 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 CBX1P3-201ENST00000413296 527 ntBASIC6.8□□□□□ -1.32
COPAP53621 MTND4LP21-201ENST00000415303 295 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL359885.1-201ENST00000415786 903 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 AJ239321.1-201ENST00000424255 564 ntBASIC6.8□□□□□ -1.32
COPAP53621 ZFAND6P1-201ENST00000434138 605 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL590399.4-201ENST00000436561 601 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.8□□□□□ -1.32
COPAP53621 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.8□□□□□ -1.32
COPAP53621 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 TIMM8BP2-201ENST00000445940 251 ntBASIC6.8□□□□□ -1.32
COPAP53621 MTND2P39-201ENST00000457230 764 ntBASIC6.8□□□□□ -1.32
COPAP53621 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.8□□□□□ -1.32
COPAP53621 RPL7AP23-201ENST00000482625 776 ntBASIC6.8□□□□□ -1.32
COPAP53621 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.8□□□□□ -1.32
COPAP53621 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.8□□□□□ -1.32
COPAP53621 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 AL445383.1-201ENST00000554689 874 ntBASIC6.8□□□□□ -1.32
COPAP53621 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 AC018558.5-201ENST00000565840 952 ntBASIC6.8□□□□□ -1.32
COPAP53621 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.8□□□□□ -1.32
COPAP53621 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 AL583832.1-201ENST00000603227 784 ntBASIC6.8□□□□□ -1.32
COPAP53621 AC011891.2-201ENST00000604949 397 ntBASIC6.8□□□□□ -1.32
COPAP53621 AL445647.2-201ENST00000615170 130 ntBASIC6.8□□□□□ -1.32
COPAP53621 CXADRP3-202ENST00000617265 1100 ntBASIC6.8□□□□□ -1.32
COPAP53621 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
COPAP53621 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
COPAP53621 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.8□□□□□ -1.32
COPAP53621 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
COPAP53621 AC020658.2-201ENST00000559030 4020 ntBASIC6.79□□□□□ -1.32
COPAP53621 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.79□□□□□ -1.32
COPAP53621 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.79□□□□□ -1.32
COPAP53621 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.79□□□□□ -1.32
COPAP53621 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.79□□□□□ -1.32
COPAP53621 ZNF101P1-201ENST00000435701 1720 ntBASIC6.79□□□□□ -1.32
COPAP53621 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.79□□□□□ -1.32
COPAP53621 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 CAP1P2-201ENST00000417455 1409 ntBASIC6.79□□□□□ -1.32
COPAP53621 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 AL353626.3-201ENST00000413399 657 ntBASIC6.79□□□□□ -1.32
COPAP53621 MRPS21P5-201ENST00000417885 231 ntBASIC6.79□□□□□ -1.32
COPAP53621 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.79□□□□□ -1.32
COPAP53621 UBBP5-201ENST00000446970 266 ntBASIC6.79□□□□□ -1.32
COPAP53621 EEF1B2P3-201ENST00000447718 678 ntBASIC6.79□□□□□ -1.32
COPAP53621 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 RN7SL413P-201ENST00000482700 297 ntBASIC6.79□□□□□ -1.32
COPAP53621 RPL37P23-201ENST00000492641 294 ntBASIC6.79□□□□□ -1.32
COPAP53621 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 AL390198.2-201ENST00000510553 222 ntBASIC6.79□□□□□ -1.32
COPAP53621 RNA5SP116-201ENST00000516132 98 ntBASIC6.79□□□□□ -1.32
COPAP53621 Vault.2-201ENST00000516519 98 ntBASIC6.79□□□□□ -1.32
COPAP53621 AC104997.1-201ENST00000519761 717 ntBASIC6.79□□□□□ -1.32
COPAP53621 OR4A42P-201ENST00000531397 938 ntBASIC6.79□□□□□ -1.32
COPAP53621 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.79□□□□□ -1.32
COPAP53621 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.79□□□□□ -1.32
COPAP53621 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 TDGP1-201ENST00000543961 1229 ntBASIC6.79□□□□□ -1.32
COPAP53621 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 RPL12P48-201ENST00000605620 304 ntBASIC6.79□□□□□ -1.32
COPAP53621 OR7M1P-201ENST00000608946 533 ntBASIC6.79□□□□□ -1.32
COPAP53621 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 MIR7109-201ENST00000613748 65 ntBASIC6.79□□□□□ -1.32
COPAP53621 MIR6806-201ENST00000622141 64 ntBASIC6.79□□□□□ -1.32
COPAP53621 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COPAP53621 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
COPAP53621 OLMALINC-203ENST00000641087 3779 ntBASIC6.79□□□□□ -1.32
COPAP53621 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms