Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 AL590004.3-202ENST00000445883 451 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.75□□□□□ -1.33
CASP4P49662 MTND6P8-201ENST00000503471 522 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC112484.3-201ENST00000505910 329 ntBASIC6.75□□□□□ -1.33
CASP4P49662 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 SNX18P25-201ENST00000510539 758 ntBASIC6.75□□□□□ -1.33
CASP4P49662 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 OR4A41P-201ENST00000533053 928 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.75□□□□□ -1.33
CASP4P49662 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CASP4P49662 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.75□□□□□ -1.33
CASP4P49662 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.75□□□□□ -1.33
CASP4P49662 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.75□□□□□ -1.33
CASP4P49662 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.75□□□□□ -1.33
CASP4P49662 AC027334.1-201ENST00000603257 310 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC244100.4-201ENST00000617747 388 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC116667.2-201ENST00000641075 823 ntBASIC6.75□□□□□ -1.33
CASP4P49662 AC010168.2-201ENST00000562691 5428 ntBASIC6.75□□□□□ -1.33
CASP4P49662 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CASP4P49662 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CASP4P49662 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.75□□□□□ -1.33
CASP4P49662 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.74□□□□□ -1.33
CASP4P49662 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 PPBPP2-201ENST00000513150 1362 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC078880.4-201ENST00000617627 1749 ntBASIC6.74□□□□□ -1.33
CASP4P49662 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 RN7SKP237-201ENST00000364663 301 ntBASIC6.74□□□□□ -1.33
CASP4P49662 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.74□□□□□ -1.33
CASP4P49662 YWHAZP6-201ENST00000399764 738 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.74□□□□□ -1.33
CASP4P49662 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.74□□□□□ -1.33
CASP4P49662 AL354893.1-201ENST00000433735 348 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AL645936.1-201ENST00000441979 518 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.74□□□□□ -1.33
CASP4P49662 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.74□□□□□ -1.33
CASP4P49662 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.74□□□□□ -1.33
CASP4P49662 MARK2P8-201ENST00000476069 952 ntBASIC6.74□□□□□ -1.33
CASP4P49662 RPS27P20-201ENST00000492051 246 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AL117692.1-201ENST00000494283 713 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC008945.1-201ENST00000505144 499 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.74□□□□□ -1.33
CASP4P49662 NATP-201ENST00000523491 878 ntBASIC6.74□□□□□ -1.33
CASP4P49662 OR6M2P-201ENST00000529831 871 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AL078601.3-201ENST00000573303 535 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AP005136.2-201ENST00000583253 1049 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 AC008555.7-201ENST00000605008 583 ntBASIC6.74□□□□□ -1.33
CASP4P49662 MIR6721-201ENST00000617181 87 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC111152.1-202ENST00000635848 339 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AC090181.3-201ENST00000624777 1514 ntBASIC6.74□□□□□ -1.33
CASP4P49662 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CASP4P49662 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CASP4P49662 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CASP4P49662 AC011416.1-201ENST00000514947 1732 ntBASIC6.73□□□□□ -1.33
CASP4P49662 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CASP4P49662 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 HMGA1P8-201ENST00000414130 321 ntBASIC6.73□□□□□ -1.33
CASP4P49662 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 AC079922.1-201ENST00000443291 359 ntBASIC6.73□□□□□ -1.33
CASP4P49662 AL512593.1-201ENST00000444758 779 ntBASIC6.73□□□□□ -1.33
CASP4P49662 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 OR7E22P-201ENST00000478335 1035 ntBASIC6.73□□□□□ -1.33
CASP4P49662 RPL12P30-201ENST00000488389 499 ntBASIC6.73□□□□□ -1.33
CASP4P49662 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.73□□□□□ -1.33
CASP4P49662 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.73□□□□□ -1.33
CASP4P49662 GLYATL1P2-202ENST00000588046 902 ntBASIC6.73□□□□□ -1.33
CASP4P49662 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.73□□□□□ -1.33
CASP4P49662 AL080312.2-201ENST00000613001 630 ntBASIC6.73□□□□□ -1.33
CASP4P49662 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.73□□□□□ -1.33
CASP4P49662 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.73□□□□□ -1.33
CASP4P49662 AC018659.2-201ENST00000624690 715 ntBASIC6.73□□□□□ -1.33
CASP4P49662 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.73□□□□□ -1.33
CASP4P49662 AC099654.11-201ENST00000638857 294 ntBASIC6.73□□□□□ -1.33
CASP4P49662 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CASP4P49662 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.73□□□□□ -1.33
CASP4P49662 CCNT2P1-201ENST00000423082 1315 ntBASIC6.73□□□□□ -1.33
CASP4P49662 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 220.1 ms