Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CR1P49238 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CX3CR1P49238 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CR1P49238 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CR1P49238 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.51□□□□□ -1.53
CX3CR1P49238 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CX3CR1P49238 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CX3CR1P49238 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.51□□□□□ -1.53
CX3CR1P49238 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CR1P49238 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CR1P49238 AC092692.1-201ENST00000623625 2595 ntBASIC5.51□□□□□ -1.53
CX3CR1P49238 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CR1P49238 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CX3CR1P49238 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 RN7SKP257-201ENST00000364525 309 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 AL445238.1-204ENST00000400311 463 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AL033519.1-201ENST00000407266 307 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AL034369.1-201ENST00000453808 477 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC002075.1-201ENST00000457396 676 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AL022319.1-201ENST00000458183 1167 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 SLC25A51P1-201ENST00000468432 871 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CR1P49238 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC139713.1-202ENST00000512366 460 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 RNA5SP418-201ENST00000515951 117 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AC131935.1-201ENST00000524621 333 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AC084851.2-201ENST00000530377 364 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 OR4A40P-201ENST00000533878 948 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 AL589863.1-201ENST00000595383 631 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.5□□□□□ -1.53
CX3CR1P49238 AC116667.2-201ENST00000641075 823 ntBASIC5.5□□□□□ -1.53
CX3CR1P49238 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CX3CR1P49238 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CX3CR1P49238 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CX3CR1P49238 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CX3CR1P49238 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 AL136984.1-201ENST00000607611 1893 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CX3CR1P49238 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CR1P49238 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CX3CR1P49238 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.49□□□□□ -1.53
CX3CR1P49238 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AL390879.1-201ENST00000439143 386 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 GTF2IP14-201ENST00000441415 586 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.49□□□□□ -1.53
CX3CR1P49238 RPS27AP3-201ENST00000453803 454 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 RANP2-201ENST00000456833 229 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AC090589.1-201ENST00000473109 362 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 MTCO1P55-201ENST00000489829 745 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CR1P49238 RNA5SP96-201ENST00000516041 107 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.49□□□□□ -1.53
CX3CR1P49238 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.49□□□□□ -1.53
CX3CR1P49238 AC037479.1-201ENST00000558361 625 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.49□□□□□ -1.53
CX3CR1P49238 MIR4732-201ENST00000581873 76 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 RN7SL475P-201ENST00000583379 298 ntBASIC5.49□□□□□ -1.53
CX3CR1P49238 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms