Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.86□□□□□ -1.47
RFC3P40938 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 PFN1P8-201ENST00000497012 543 ntBASIC5.86□□□□□ -1.47
RFC3P40938 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 SNX18P25-201ENST00000510539 758 ntBASIC5.86□□□□□ -1.47
RFC3P40938 OR51A1P-201ENST00000511110 946 ntBASIC5.86□□□□□ -1.47
RFC3P40938 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 RN7SKP70-201ENST00000516655 271 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.86□□□□□ -1.47
RFC3P40938 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.86□□□□□ -1.47
RFC3P40938 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.86□□□□□ -1.47
RFC3P40938 AC006512.2-201ENST00000543250 486 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AC008055.1-201ENST00000547032 609 ntBASIC5.86□□□□□ -1.47
RFC3P40938 TPRX1P1-201ENST00000557620 319 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.86□□□□□ -1.47
RFC3P40938 AL078623.1-201ENST00000602702 907 ntBASIC5.86□□□□□ -1.47
RFC3P40938 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 AC009120.7-201ENST00000623452 780 ntBASIC5.86□□□□□ -1.47
RFC3P40938 AP001052.1-201ENST00000626421 99 ntBASIC5.86□□□□□ -1.47
RFC3P40938 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.86□□□□□ -1.47
RFC3P40938 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.86□□□□□ -1.47
RFC3P40938 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
RFC3P40938 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RFC3P40938 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RFC3P40938 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RFC3P40938 MIR1282-201ENST00000408865 101 ntBASIC5.85□□□□□ -1.47
RFC3P40938 RN7SKP240-201ENST00000410583 375 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC096537.2-201ENST00000413707 714 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.85□□□□□ -1.47
RFC3P40938 AL035422.1-201ENST00000414193 397 ntBASIC5.85□□□□□ -1.47
RFC3P40938 TRGV5P-201ENST00000419915 354 ntBASIC5.85□□□□□ -1.47
RFC3P40938 RPL7AP14-201ENST00000424041 802 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.85□□□□□ -1.47
RFC3P40938 AC092865.3-201ENST00000425390 1026 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC245884.2-201ENST00000426257 404 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 REG1CP-206ENST00000447469 496 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AL358876.1-201ENST00000453364 1075 ntBASIC5.85□□□□□ -1.47
RFC3P40938 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC117395.1-201ENST00000487390 403 ntBASIC5.85□□□□□ -1.47
RFC3P40938 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.85□□□□□ -1.47
RFC3P40938 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.85□□□□□ -1.47
RFC3P40938 AC093815.1-201ENST00000508637 280 ntBASIC5.85□□□□□ -1.47
RFC3P40938 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.85□□□□□ -1.47
RFC3P40938 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 TOMM20P1-201ENST00000534518 427 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC026826.3-201ENST00000561747 158 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.85□□□□□ -1.47
RFC3P40938 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 AL953862.2-201ENST00000603089 820 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC091167.5-201ENST00000605689 894 ntBASIC5.85□□□□□ -1.47
RFC3P40938 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 AC005393.1-201ENST00000617916 584 ntBASIC5.85□□□□□ -1.47
RFC3P40938 OR1N1-202ENST00000619659 939 ntBASIC5.85□□□□□ -1.47
RFC3P40938 MIR6811-201ENST00000620409 58 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC012653.2-201ENST00000621880 420 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AL162377.2-201ENST00000624532 337 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AC073488.6-201ENST00000632293 754 ntBASIC5.85□□□□□ -1.47
RFC3P40938 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
RFC3P40938 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RFC3P40938 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.85□□□□□ -1.47
RFC3P40938 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RFC3P40938 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.84□□□□□ -1.47
RFC3P40938 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
RFC3P40938 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RFC3P40938 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFC3P40938 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RFC3P40938 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.84□□□□□ -1.47
RFC3P40938 RNA5SP433-201ENST00000364491 114 ntBASIC5.84□□□□□ -1.47
RFC3P40938 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.84□□□□□ -1.47
RFC3P40938 RPL23AP85-201ENST00000421838 433 ntBASIC5.84□□□□□ -1.47
RFC3P40938 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms