Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.04□□□□□ -1.28
LTBRP36941 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 RN7SL187P-201ENST00000495587 303 ntBASIC7.04□□□□□ -1.28
LTBRP36941 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.04□□□□□ -1.28
LTBRP36941 HAUS1P3-201ENST00000523909 662 ntBASIC7.04□□□□□ -1.28
LTBRP36941 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 AL356801.1-201ENST00000559320 294 ntBASIC7.04□□□□□ -1.28
LTBRP36941 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.04□□□□□ -1.28
LTBRP36941 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.04□□□□□ -1.28
LTBRP36941 AC008521.2-201ENST00000591021 259 ntBASIC7.04□□□□□ -1.28
LTBRP36941 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC7.04□□□□□ -1.28
LTBRP36941 AC005252.1-201ENST00000604518 1063 ntBASIC7.04□□□□□ -1.28
LTBRP36941 AC012213.4-201ENST00000606457 354 ntBASIC7.04□□□□□ -1.28
LTBRP36941 AC122108.2-201ENST00000611946 526 ntBASIC7.04□□□□□ -1.28
LTBRP36941 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.04□□□□□ -1.28
LTBRP36941 AP001153.1-201ENST00000641024 338 ntBASIC7.04□□□□□ -1.28
LTBRP36941 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
LTBRP36941 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
LTBRP36941 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.04□□□□□ -1.28
LTBRP36941 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 AL445523.1-201ENST00000451184 1362 ntBASIC7.04□□□□□ -1.28
LTBRP36941 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
LTBRP36941 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.04□□□□□ -1.28
LTBRP36941 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
LTBRP36941 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 AC008432.1-201ENST00000615912 1320 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 MAPK10-347ENST00000641762 2856 ntBASIC7.03□□□□□ -1.28
LTBRP36941 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 AC005702.3-201ENST00000585345 1447 ntBASIC7.03□□□□□ -1.28
LTBRP36941 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 LYARP1-201ENST00000436977 1501 ntBASIC7.03□□□□□ -1.28
LTBRP36941 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 COX6B1P3-201ENST00000312310 260 ntBASIC7.03□□□□□ -1.28
LTBRP36941 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 AL031985.1-201ENST00000392713 418 ntBASIC7.03□□□□□ -1.28
LTBRP36941 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 UBE2V1P1-201ENST00000430836 445 ntBASIC7.03□□□□□ -1.28
LTBRP36941 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.03□□□□□ -1.28
LTBRP36941 PMS2P9-201ENST00000441237 515 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.03□□□□□ -1.28
LTBRP36941 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 RAB28P3-201ENST00000448325 597 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AL627224.1-201ENST00000448334 444 ntBASIC7.03□□□□□ -1.28
LTBRP36941 OR52I1-201ENST00000450052 1050 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC013399.1-201ENST00000450311 418 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.03□□□□□ -1.28
LTBRP36941 NAP1L1P3-201ENST00000462291 880 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 MTATP6P1-201ENST00000514057 681 ntBASIC7.03□□□□□ -1.28
LTBRP36941 Y_RNA.688-201ENST00000516565 95 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC7.03□□□□□ -1.28
LTBRP36941 OR7E128P-201ENST00000532736 1024 ntBASIC7.03□□□□□ -1.28
LTBRP36941 RPL3P13-201ENST00000550415 216 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC104229.1-201ENST00000561364 255 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.03□□□□□ -1.28
LTBRP36941 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC7.03□□□□□ -1.28
LTBRP36941 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.03□□□□□ -1.28
LTBRP36941 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LTBRP36941 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.03□□□□□ -1.28
LTBRP36941 AL589863.1-201ENST00000595383 631 ntBASIC7.03□□□□□ -1.28
LTBRP36941 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms