Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 SOCS5P1-201ENST00000440415 949 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.15□□□□□ -1.42
SHMT2P34897 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.15□□□□□ -1.42
SHMT2P34897 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.15□□□□□ -1.42
SHMT2P34897 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.15□□□□□ -1.42
SHMT2P34897 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.15□□□□□ -1.42
SHMT2P34897 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.15□□□□□ -1.42
SHMT2P34897 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC009120.3-201ENST00000563335 499 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 RN7SL475P-201ENST00000583379 298 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHMT2P34897 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AL008723.3-201ENST00000608926 449 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AL138960.1-201ENST00000613838 513 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.15□□□□□ -1.42
SHMT2P34897 MIR7159-201ENST00000620587 66 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.15□□□□□ -1.42
SHMT2P34897 AL596275.2-207ENST00000641188 675 ntBASIC6.15□□□□□ -1.42
SHMT2P34897 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHMT2P34897 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SHMT2P34897 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SHMT2P34897 LINC01616-201ENST00000561816 2280 ntBASIC6.15□□□□□ -1.43
SHMT2P34897 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.15□□□□□ -1.43
SHMT2P34897 PPBPP2-201ENST00000513150 1362 ntBASIC6.15□□□□□ -1.43
SHMT2P34897 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SHMT2P34897 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHMT2P34897 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.15□□□□□ -1.43
SHMT2P34897 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 AC011369.2-201ENST00000624423 1567 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SHMT2P34897 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.14□□□□□ -1.43
SHMT2P34897 SNORD8-201ENST00000363915 110 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 RNA5SP478-201ENST00000364657 115 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AC099535.1-201ENST00000408928 371 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 RPL7AP14-201ENST00000424041 802 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 AC112492.2-201ENST00000432774 1030 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AL645936.1-201ENST00000441979 518 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 RN7SL326P-201ENST00000477493 296 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 OR7E22P-201ENST00000478335 1035 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 RPL12P31-201ENST00000478433 450 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 OR9A1P-202ENST00000484361 945 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AC106822.1-201ENST00000502647 526 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 RN7SKP67-201ENST00000515905 235 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.14□□□□□ -1.43
SHMT2P34897 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.14□□□□□ -1.43
SHMT2P34897 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.14□□□□□ -1.43
SHMT2P34897 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 AL078601.3-201ENST00000573303 535 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 MIR3154-201ENST00000577829 84 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHMT2P34897 AC005332.4-201ENST00000592752 579 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 MIR6780B-201ENST00000610307 79 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 AC119674.1-213ENST00000641177 1386 ntBASIC6.14□□□□□ -1.43
SHMT2P34897 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHMT2P34897 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.14□□□□□ -1.43
SHMT2P34897 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHMT2P34897 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.14□□□□□ -1.43
SHMT2P34897 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.14□□□□□ -1.43
SHMT2P34897 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.13□□□□□ -1.43
SHMT2P34897 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms