Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC073333.2-201ENST00000603589 769 ntBASIC6.58□□□□□ -1.36
HOXA9P31269 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA9P31269 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXA9P31269 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA9P31269 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA9P31269 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA9P31269 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.58□□□□□ -1.36
HOXA9P31269 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXA9P31269 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA9P31269 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXA9P31269 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA9P31269 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA9P31269 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA9P31269 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA9P31269 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA9P31269 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA9P31269 AL133243.2-201ENST00000610331 1621 ntBASIC6.58□□□□□ -1.36
HOXA9P31269 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 RNU1-49P-201ENST00000363468 159 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 RNA5SP510-201ENST00000364697 99 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 RN7SKP69-201ENST00000365390 305 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA9P31269 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 CST12P-201ENST00000457644 362 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AC007998.1-201ENST00000474156 672 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AC106872.4-201ENST00000510050 523 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA9P31269 MTATP6P1-201ENST00000514057 681 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 OR5H7P-201ENST00000514084 930 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 SCARNA18.1-201ENST00000516330 83 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 RNA5SP434-201ENST00000516647 121 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA9P31269 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 AC015818.6-201ENST00000584274 634 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AL591167.1-201ENST00000607321 456 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AL008723.3-201ENST00000608926 449 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AP000894.4-201ENST00000610185 483 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 AC103703.1-201ENST00000634783 663 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AL596275.2-208ENST00000641192 594 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 AC110597.1-201ENST00000562669 3176 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 Z93929.1-201ENST00000418200 1475 ntBASIC6.57□□□□□ -1.36
HOXA9P31269 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXA9P31269 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA9P31269 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA9P31269 AC008627.1-201ENST00000517511 1704 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
HOXA9P31269 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HOXA9P31269 AC105114.1-201ENST00000624795 1862 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXA9P31269 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 AC005332.9-201ENST00000620266 2921 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 RNU1-134P-201ENST00000362935 165 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 RN7SKP81-201ENST00000365603 331 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 RNA5SP284-201ENST00000384547 118 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.56□□□□□ -1.36
HOXA9P31269 CHEK2P5-201ENST00000423877 246 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 MTND6P12-201ENST00000428247 522 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 SEPT14P12-201ENST00000442280 560 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 TRIM60P16-201ENST00000444048 694 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 SNORA58-201ENST00000505219 137 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 AC006499.4-201ENST00000510947 694 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.56□□□□□ -1.36
HOXA9P31269 AC022826.1-201ENST00000519383 805 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXA9P31269 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXA9P31269 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXA9P31269 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXA9P31269 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXA9P31269 AC073862.4-201ENST00000622982 854 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 AC073488.3-201ENST00000631611 778 ntBASIC6.56□□□□□ -1.36
HOXA9P31269 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA9P31269 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXA9P31269 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms